KEGG B.halodurans: BH0127

Bacillus halodurans: BH0127

Entry

BH0127 CDS B.halodurans

Gene name rpoC

Definition DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)

Orthology K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]

Pathway bha00230 Purine metabolism
bha00240 Pyrimidine metabolism
bha01100 Metabolic pathways
bha03020 RNA polymerase

Class Metabolism; Nucleotide Metabolism; Purine metabolism [PATH:bha00230]
Metabolism; Nucleotide Metabolism; Pyrimidine metabolism
[PATH:bha00240]
Genetic Information Processing; Transcription; RNA polymerase
[PATH:bha03020]
Genetic Information Processing; Replication and Repair; DNA repair
and recombination proteins

SSDB

Motif Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3
RNA_pol_Rpb1_4 Apocytochr_F_C

Other DBs NCBI-GI: 15612690
NCBI-GeneID: 893610
UniProt: Q9Z9M1

Position 159295..162915

AA seq 1206 aa
MIDVNNFEYMKIGLASPNKIRSWSRGEVKKPETINYRTLKPEKDGLFCERIFGPQKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRSLEEVIYFASYVVTDPGDTPLEKKQLLSEKEFRAYLDKYGRSFTAQMGAEAIRKLLM
DIDLDKEVDGLKEELQTAQGQRRTRAIKRLEVLEAFRNSGNEPSWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMKELVSKGLAHNIKSAKRKVERVQPEVWDVLEEVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIKLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARILMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTMEREGAKGEGSVFKDTNEALIAYQNGYVHLHTRIAIP
VASLGKTTFKEEQNSQLLLTTVGKLIFNEILPESFPYVNEPTAHNLEVETPSKYMVPTST
NVKELFQERDVVAPFKKGFLGNIIAEVFKKFKITETSKMLDRMKDLGFKYSTKAGITVGV
ADIVVLPEKKEILAEAEKKVDRVLKQFRRGLITEEERYDRVISIWSEAKDVIQDKLMGSL
DKRNPIFMMSDSGARGNASNFTQLAGMRGLMANPSGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIVREDDCGTDRGLEVEAIKEGNEIIEGLY
DRLVGRVAFKTVRHPETGEPIVKKNELIHEDLAKQIVEAGVEQVTIRSVFTCDTRHGVCK
KCYGRNLATGSDVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQELF
EARNPKGQAVITEIEGEVTNINEADKREITVKGEMETKTYSIPYGARIKVELGEQVVPGQ
SLTEGSIDPKELLKVQGMTGVQEYLLREVQKVYRMQGVEIGDKHVEVMVRQMLRKIRVID
AGDTEVLPGSLIEIQHFNDENKKVLLSGKRPATGRPVLLGITKASLETDSFLSAASFQET
TRVLTDAAIKGKRDELVGLKENVIIGKLVPAGTGMNRYRNLDIVSDYDQQAVGTEEAVME
EAVTTE

NT seq 3621 nt +upstreamnt +downstreamnt
ttgatagacgtaaacaattttgagtacatgaaaattggtcttgcttcaccaaataaaatt
cgttcttggtctcgcggcgaagtgaaaaagccggaaaccattaactaccgtaccctcaaa
ccagaaaaagacgggcttttctgcgagcgtattttcggtccgcaaaaggactgggagtgt
cactgtggaaaatataagcgcgttcgctacaaaggggtcgtttgtgaccgttgtggtgtt
gaagtcacgcgggcgaaggttcgccgtgagcggatgggtcatattgagctagcagcacct
gtctctcatatttggtactttaaaggaatcccaagccgaatggggcttgttttggatatg
tctccacgatcacttgaagaagtcatctactttgcttcttatgtagtgacagatccaggg
gatacaccacttgaaaagaaacaattactttctgaaaaagaatttcgcgcgtacttagat
aaatatggccgctcatttacagcgcaaatgggggcggaagcgattcgtaagctgcttatg
gatatcgacctcgataaagaagtcgatgggctaaaagaagagcttcaaacagcgcaaggc
caacgccggacacgtgcaattaaacgacttgaggtgcttgaagcatttcgtaactctgga
aatgaaccttcttggatgatccttgatgttcttccggtcattccaccagaattacgtcca
atggttcagcttgatggggggcgctttgcaacctctgacctcaacgacttatatcgtcgc
gtgattaaccgaaacaaccggttaaagcgtctcttagatctaggcgcaccaagcatcatt
gtgcaaaacgagaagcgtatgctgcaagaagcggttgacgctctcatcgataacggtcgc
cgtggccgcccagtgacaggtcctggtaaccgcccacttaaatctctttctcatatgttg
aaagggaagcaagggcgcttccgtcaaaaccttctcgggaagcgtgtagactactcgggt
cgttccgttatcgtcgtaggtccgaacttaaaaatgtatcagtgcggcctgccaaaggaa
atggcgcttgagctgttcaagccatttgtcatgaaagagcttgtaagcaaagggttagca
cataacattaaaagcgcgaaacgaaaagtggaacgggtacaaccagaggtatgggacgtt
cttgaagaagttatcaaagagcatccggttcttcttaaccgtgcaccgacccttcaccgt
ttaggaatccaagcgtttgagccgacactcgtggaaggtcgtgcgatcaagctgcatccg
cttgtatgtacagcgtataatgccgactttgacggggaccaaatggcggttcacgtcccg
ctatcagcagaagctcaagctgaggcgcggattttaatgttggctgcgcaaaacatctta
aacccgaaagatggaaagccggttgttacgccgtcacaggatatggttcttgggaactac
tatttgacgatggagcgtgaaggtgcaaaaggcgaaggttctgtatttaaagatacgaac
gaagctttaatcgcgtaccaaaacggctatgttcatttgcatacacggattgcgattcct
gttgcttctttagggaaaacgacatttaaagaagagcaaaactctcagttgttgttaaca
acggttggaaagcttatttttaatgagattctacctgaatcgttcccttatgtgaatgag
ccaactgctcataacttagaggtggaaacaccgagcaagtatatggttccgacttcaacc
aatgtgaaggaacttttccaagagcgtgatgtagtcgctccatttaagaaaggattcctt
ggaaacatcattgctgaagtgtttaagaagtttaagattaccgaaacgtctaaaatgctt
gaccgtatgaaagacctcgggtttaaatactcaacgaaagctggtattacggtcggtgtt
gccgatatcgtagtcctgccagagaagaaggaaattcttgctgaagctgagaaaaaggtt
gatcgtgtgcttaagcaattccgccgtggtttaattacggaagaagagcgttatgaccgt
gtcatctccatctggagtgaagcgaaggatgtcattcaagataagttgatgggctcctta
gataaacgcaacccgatctttatgatgagtgactctggtgcccgtggtaacgcctctaac
tttacacagttagcaggtatgcgtgggttaatggcgaacccgtccggtcgaattatcgaa
cttccaattaaatcaagcttccgtgaagggttaaccgtcctcgagtactttatttcgact
cacggtgcccgtaaaggtcttgccgatacagcccttaagacagctgactctggttactta
acacgacgtcttgttgacgttgcccaggatgtcatcgttcgcgaggatgattgtggtacg
gatcgtggcttagaagtggaagccattaaggaagggaacgaaatcattgaaggtctttac
gaccgacttgttggccgcgtagcctttaagacggttcgtcaccctgaaaccggtgagccg
attgtaaagaaaaacgagctaattcacgaagatctcgcaaagcaaattgttgaagctgga
gttgaacaagtaacgattcgctctgtcttcacatgcgatacacgtcacggtgtatgtaaa
aaatgctacggccgcaaccttgcaacaggtagcgatgtagaagttggcgaagcggtaggt
atcatcgcagctcaatcgatcggtgaaccaggaacgcagttaacgatgcgtacgttccac
accggtggggttgcgggagacgatattactcaaggtcttccgcggattcaggagctattc
gaagctcgtaatccaaaagggcaagcggttatcaccgagattgaaggggaagttaccaac
attaatgaggcagataagcgcgaaattacggttaaaggtgaaatggagacgaaaacttac
tccattccttacggcgctcgtattaaagtagagcttggcgagcaagtcgttccgggacag
agcttaactgaagggtctattgatccgaaagagttgctgaaagttcaagggatgacaggt
gtccaagaatacttgcttcgtgaagtacaaaaagtataccgtatgcaaggggtagaaatt
ggcgacaagcacgtagaagtgatggtgcgtcaaatgctacgtaagattcgcgttattgat
gcgggagacacagaagtgttgccaggctctctaattgagatccaacactttaatgatgag
aacaaaaaagttctcctttcagggaaacgccctgcaactggtcgcccagtcttacttgga
attacgaaagcatcccttgaaacagactcgttcctatcagcggcatcgttccaggaaacg
acgcgtgttcttaccgatgcagccattaaagggaaaagagatgagcttgttggcctaaaa
gaaaatgtcatcatcgggaagctcgtgccagcaggtacaggtatgaaccgttaccgtaac
ttagacattgtgtccgattatgaccaacaagccgttggtaccgaagaagcagtgatggaa
gaagcggtaacgacagaataa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (20)

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