KEGG T00039: BH2209

Bacillus halodurans: BH2209

Entry

BH2209 CDS T00039

Gene name

ligD

Definition

ATP-dependent DNA ligase (EC:6.5.1.1)

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

bha Bacillus halodurans

Pathway

bha03410	Base excision repair
bha03420	Nucleotide excision repair
bha03430	Mismatch repair
bha03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:bha03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:bha03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:bha03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:bha03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_C

Other DBs

NCBI-GI:

15614772

NCBI-GeneID:

891749

UniProt:

Q9KAS8

Position

2332098..2333933

AA seq 611 aa
MKPMLLQTTTDLPTGDNWRYEVKYDGFRTILFWTKETIRLESRNERLLTDQFPEIHDFCQ
RISNKVEAWLPITIDGELVHLVSPYRAHFAPIQTRSFMRKHETIAASSIKTPATLLAFDI
LELKGKTLVDLPYDERKKQLKALLKAIDVPLEPTIQSNACLQMIPAQTDGQALWQAVELH
HGEGVVAKDRFSDWTEGKRTNRWLKKKNFRQVTVFLTAYDPVNGYFHFAVYRDGTSVEVG
NVTHGFEDHERETLIAFMKQNGMKKGKRYVLEPSVCFDVDCIDFDGKHLREPMFHRFRLD
VKPAQCTWKSLQRQLAPLPPQVEITHPDKPLWPRQMIQKIDYLYYLQEVAPAMLPFLIDR
PLTVIRYPHGVRSNTEREAFYQKNCPDYAPSFVKTVRLDEIRYIVCNDIQTLVWLGNQLA
LEFHIPYHPVPYTKPSEIVFDLDPPSISQFSLAVKAAQLMKNMFDALKLQSFVKTSGGKG
LQLYLPLPDNTFTYDDTRLFSKTVCELLCSQFPEDFTTERLKKHRGQRLYLDYLQHDEGK
TIVAPFSPRGNEGGFIATPLRWEEVTNTLSPDQFPMKAVLERYRNGIQPFATFAEAKKTQ
PFADVLKKFKR

NT seq 1836 nt +upstreamnt +downstreamnt
gtgaaaccaatgcttttacagacaacgaccgatttaccgacaggcgataactggcgctat
gaagtgaagtacgatgggtttcgtacgatcctcttttggacaaaggagacgattcgcctt
gagagcagaaatgaacgacttttgaccgatcagtttcctgaaatacacgatttttgccaa
cgaatttccaataaagtggaagcctggctccctataacgattgatggtgagcttgtccat
cttgttagcccgtaccgagcccactttgccccgattcagacgcgatcgtttatgcgtaag
cacgaaacgattgcagctagtagcattaagacacctgctactttattggcgtttgacatc
cttgaactaaaaggaaaaacgcttgtagacttaccgtatgatgaacgaaaaaaacaactt
aaggccctcctaaaggcgatcgatgttccgttagaaccaacgatccaatcgaatgcgtgc
ttgcaaatgatcccggcacaaaccgatggtcaagccctttggcaagccgtagagctccat
cacggggaaggagtcgtcgctaaggataggttctccgattggacagaaggaaaacgcaca
aatcgctggttaaaaaagaagaattttcgacaggtgaccgtttttttaacggcctatgat
cctgtgaacggctattttcattttgctgtctatcgggatggaactagcgtggaggttgga
aatgtcacccacggttttgaggatcacgaacgagaaacactcattgcttttatgaaacaa
aatggaatgaaaaaagggaaaagatatgtccttgaaccgtccgtttgctttgatgtagat
tgcatcgattttgatgggaaacatttgcgcgaaccgatgttccatcgattcagactcgat
gtcaaacctgcacaatgcacgtggaaatcgctgcaaagacagctagccccgctgcctcca
caagttgagataactcatccagataagccgctttggccgagacaaatgattcaaaagatc
gattatctttactatttgcaggaggttgcgcctgcgatgttaccttttttaatagatcga
ccattgaccgtcatccgttaccctcacggtgtacgaagcaacacagagcgcgaggcattc
tatcaaaagaactgccccgattatgccccgtcgtttgttaaaacggttcgtttagacgaa
atccgttatattgtatgcaatgatattcaaacattagtttggctcggaaaccagcttgca
cttgaatttcatatcccttatcaccccgttccttacacaaagccgagtgagattgttttt
gacttagacccaccatcaattagtcagttttcacttgctgttaaggcggctcaactaatg
aaaaacatgttcgatgcccttaaattacaatcatttgtgaaaacatcgggaggaaaaggg
ttacagctctacttgccactcccagacaacacgttcacctatgacgatacccgattattt
tcgaaaacggtttgcgagttgctttgcagccaattccctgaagatttcacgaccgaacga
ttaaaaaaacaccgaggacagcggctctatttagattacttacagcacgatgaaggaaaa
acgatcgtcgcccccttttctccccgaggcaatgaaggaggatttatcgcgaccccttta
cgttgggaagaagtgactaacaccttatctcccgatcaatttccgatgaaagctgtccta
gagcggtaccgaaacggcattcagccttttgcaacctttgccgaggcaaagaaaactcag
ccttttgccgacgttttaaaaaaattcaaacgttaa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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