KEGG   Bordetella holmesii 44057: D558_1290
Entry
D558_1290         CDS       T03379                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
bhm  Bordetella holmesii 44057
Pathway
bhm00521  Streptomycin biosynthesis
bhm00523  Polyketide sugar unit biosynthesis
bhm00525  Acarbose and validamycin biosynthesis
bhm00541  O-Antigen nucleotide sugar biosynthesis
bhm01100  Metabolic pathways
bhm01110  Biosynthesis of secondary metabolites
bhm01250  Biosynthesis of nucleotide sugars
Module
bhm_M00793  dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:bhm00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 O-Antigen nucleotide sugar biosynthesis
    D558_1290 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    D558_1290 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    D558_1290 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    D558_1290 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    D558_1290 (rfbB)
Enzymes [BR:bhm01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     D558_1290 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind Polysacc_synt_2 3Beta_HSD NAD_binding_4 adh_short KR Sacchrp_dh_NADP
Other DBs
NCBI-ProteinID: AIT25968
Position
complement(1224564..1225622)
AA seq 352 aa
MKILITGGAGFIGSALIRHIVRDTQDSVVNVDKLSYAGNLASLQECASHPRHSFERVDIC
DGAALQAVFERHRPDAVMHLAAESHVDRSIDGPGQFIQTNLVGSYVLLEAARTYWAGLPQ
PARENFRFLQVSTDEVYGDLGLRAGRFIETSPYAPSSPYAASKAGADHLARAWHRTYGLP
VVVTNASNNYGPCQFPEKLIPLMLVSALRGWPLTIYGAGDQVRDWIYVEDHARALCAALR
LGRPGQTYNIGGSCELRNLEVVQQLCDLLQVLRPPKMGHYRDLIAHVADRPGHDRRYALD
SGKAAAELGWTPREDFGSGLAKTVAWYLDNPEWIADVESGAYPARWTGANAS
NT seq 1059 nt   +upstreamnt  +downstreamnt
atgaaaatcctgattaccggcggcgccggtttcatcggttcggcgctgattcgccacatc
gtccgtgacacgcaggacagcgtggtcaatgtcgacaagctcagctatgccggcaacctt
gcctccttgcaggaatgcgcctcgcacccccgccacagcttcgagcgtgtggatatctgc
gacggggcggccctgcaggcggtcttcgagcgtcatcgtcccgatgccgtcatgcatctg
gcggcggagtcgcacgtggatcgatccatcgatggtccggggcagttcatacagaccaat
ctggtgggcagttatgtcctgctggaagccgcccggacgtattgggcgggcctgccgcaa
cctgccagggagaatttccgttttctgcaggtatcgaccgatgaggtctacggcgatctg
ggcctgcgggcggggcgttttatcgaaaccagtccgtacgcgccgagctctccgtacgcg
gccagcaaggccggcgccgaccacttggcccgcgcctggcatcgcacgtatggtcttccg
gtcgtggtgaccaacgcgtcgaacaattacggcccgtgccagtttcccgaaaagctgatt
ccgctgatgctggtgtcggcgttgcgagggtggccgctgaccatctacggggcaggggat
caagtgcgcgactggatctacgtggaagaccatgcccgggcgctatgcgcggcgctgcgt
cttggtcggcccgggcaaacctataacatcggtggctcctgtgagttgcgcaatctggag
gtcgtgcagcagttgtgcgatctgctgcaggtgctgcgaccgccgaagatggggcattac
cgggatctcatcgcgcacgtggctgaccggcccggacatgaccggcgttacgcgctcgac
agtggcaaggccgccgctgagctgggctggacgccgcgtgaagacttcggcagtggcctg
gccaagacggtggcctggtatctcgacaatcccgagtggatcgcggatgtggaaagcggc
gcttatccggcgcgctggacaggcgcgaacgcttcatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (8)   
   KEGG PATHWAY (7)   
   KEGG MODULE (1)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (28)   

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