KEGG   Bordetella holmesii ATCC 51541: D560_0396
Entry
D560_0396         CDS       T03052                                 
Symbol
ftsY
Name
(GenBank) signal recognition particle-docking protein FtsY
  KO
K03110  fused signal recognition particle receptor
Organism
bho  Bordetella holmesii ATCC 51541
Pathway
bho02024  Quorum sensing
bho03060  Protein export
bho03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:bho00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    D560_0396 (ftsY)
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    D560_0396 (ftsY)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    D560_0396 (ftsY)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:bho02044]
    D560_0396 (ftsY)
Secretion system [BR:bho02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   D560_0396 (ftsY)
SSDB
Motif
Pfam: SRP54 SRP54_N AAA_16 Zeta_toxin AAA_22 AAA_30 AAA_17 APS_kinase CbiA Thymidylate_kin ABC_tran AAA_19 YqeC AAA_27 SLFN-g3_helicase MobB nSTAND3 AAA_18 ATP-synt_ab Viral_helicase1 cobW NTPase_1 NACHT ATP_bind_1 AAA_33 DO-GTPase2
Other DBs
NCBI-ProteinID: AHV94784
Position
complement(371070..372134)
AA seq 354 aa
MHPAAPPVQPEPAASPVPAVPEPVAAPVVPPAPSPSAIAPAAAAEPAAAPKKASWLNRLK
QGLARTGQSIGGIFVGVKVDENLFEELESALIMADAGIEATEKLLTELRARVKKDRIEDA
AQVKTALRQLLTQHLKPLERSFDLTRTQPLVVMIAGVNGAGKTTSIGKLAHTFQRQGASV
LLAAGDTFRAAAREQLVEWGTRNNVTVIAQEGGDPAAVAFDAVNAGRARGVGVVMIDTAG
RLPTQLHLMEELKKIRRVISKADAAAPHEVLLVVDGNTGQNALAQIRAFDAAIQLTGLVV
TKLDGTAKGGTLAAVAAGSQGVRPVPVYWIGVGEGLEDLQPFVAEEFASALLAD
NT seq 1065 nt   +upstreamnt  +downstreamnt
gtgcatccggcggcgccgcccgttcagcccgaaccggccgcctcgcctgtgcccgccgtg
ccggaacccgtcgccgcgcccgttgtgccgccggcgccttcgccttcggccatcgcgccg
gccgctgccgccgaaccggccgccgcacccaaaaaggcctcctggctcaatcgtctcaaa
cagggcctggcgcgtaccgggcagagcatcggcggcattttcgtcggcgtaaaagtcgac
gaaaatctgttcgaagagctggaatccgccctcatcatggccgatgccggtatcgaagcc
accgaaaaactcctcacggagttgcgtgcgcgcgtcaaaaaagaccgcatcgaagatgcg
gctcaggtcaagacggcgctgcgtcaactgttgacgcaacacctcaagccgctcgagcgc
agctttgacctcacgcgcacccagcctctggtggtgatgatcgccggcgtcaacggcgcc
ggcaaaacgacctccattggcaagctggcccatacctttcaacggcagggcgccagtgtg
ctgctggctgccggcgacacgttccgcgcggcagcgcgtgagcaactggtcgaatggggc
acccgcaacaacgtcaccgtcatcgcgcaggaagggggcgaccccgccgccgtggccttt
gacgcggtcaatgcgggccgggcgcgtggcgtcggcgtggtcatgatagacaccgcaggg
cgcctgcccacgcagttgcacctgatggaagaactcaagaagatccgtcgcgtcatcagc
aaggccgatgcggccgcgccgcatgaggttttactggtggtcgatggcaacaccggccag
aacgcgctggcccagatccgggcctttgacgcggccattcagctcacgggtctggtcgtg
acaaaactggacggtaccgccaagggcggcaccctggccgccgtggccgccggcagccag
ggcgtgcggccggtgcccgtctactggataggcgtgggcgagggcctggaagacttgcag
cccttcgtggccgaagagttcgcctccgccttgctggcagactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (26)   
   Pfam (26)   
All databases (35)   

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