KEGG   Bordetella holmesii ATCC 51541: D560_1339
Entry
D560_1339         CDS       T03052                                 
Symbol
topB
Name
(GenBank) DNA topoisomerase III family protein
  KO
K03169  DNA topoisomerase III [EC:5.6.2.1]
Organism
bho  Bordetella holmesii ATCC 51541
Brite
KEGG Orthology (KO) [BR:bho00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bho03032]
    D560_1339 (topB)
Enzymes [BR:bho01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     D560_1339 (topB)
DNA replication proteins [BR:bho03032]
 Prokaryotic type
  DNA Topoisomerases
   D560_1339 (topB)
SSDB
Motif
Pfam: Topoisom_bac Toprim_Crpt Toprim OrfB_Zn_ribbon HypA
Other DBs
NCBI-ProteinID: AHV94376
Position
1267196..1269832
AA seq 878 aa
MNKTLIIAEKPSVALDISRALGGFAREGDYFESERYVLASSIGHLLSLVAPNDPVKGKWS
FTHLPVIPPAFELGPTDKKSAERLKLLVRLAKRKDVDAIINACDAGREGELIFRYIIQYA
GVKKPIQRLWLQSMTQAAIREAFENLRDDVQLKPLEAAARSRAEADWLVGINGTRAMTAF
NSKDGGFFKTPVGRVQTPTLAIVAERENRIRSFVSRDYWEVHATFVAAAGLYEGRWIDPD
FKKDERDPEKRESRLWSQAAAQSVVAACRAQSGQVTEESKPSTQMSPALYDLTSLQREAN
GRFGFSAKTTLALAQTLYERHKALTYPRTDSRYLPEDYLNTVRQTMRALAEGGSHAVGGL
SRHAGTVVSNDWVKPNRRIFDNKKVSDHFAIIPTLQIPHDLSEAEGKIYDLVLKRFLAVF
FPAAEYRVTTRLTQVQGHRFKTDGKVLVSPGWLAVYGKEAQGEDANLVPVADGETVRTEE
VRAEALATKPPARYNEATLLSAMEGAGKLVDDEELREAMSERGLGTPATRAAIIEGLLNE
SYLRREGRELVPTAKARQLMTLLSGLDVTELTSPELTGEWEHKLKQIEQGGLNREAFMRE
IAQMTQVIVKRAKEYERDTVPGDYATLQTPCPKCGGVVKENYRRFACTQCDFSISKHPGG
RTFELPEVEELLAKREIGPLQGFISKMGRPFAAILRISDEYKLEFDFGQNDEDDNEPVDF
SGHTPVGACPKCSARVFEHGMSYVCEKSVGPQKTCDFRSGKVILQQEISREQMSKLLADG
RSDLLDGFVSSRTNRKFKAFLVRQPDGKIGFEFEPRGDKPARGAAKTAGKTAAKTATKTA
TKTAAKTAAKKAPAKKTAVKKTATKTAVKKAAAKKTAG
NT seq 2637 nt   +upstreamnt  +downstreamnt
atgaacaaaacgctgatcattgccgagaaaccctcggtagcactggatatatcacgcgcc
ctgggaggctttgcgcgcgaaggtgactattttgaaagcgaacgttacgtactggcttcc
agtatcgggcatttgctcagtctggtggcacccaacgacccggtcaagggtaaatggagt
ttcacccacctgccggtgatccccccggccttcgaactggggccgacggacaagaaatcc
gccgagcgcctcaagctgctcgtgcggctggccaaacgcaaagatgtggatgccatcatc
aatgcgtgtgacgcgggccgcgagggcgaattgatctttcgctacatcatccagtacgcc
ggtgtaaaaaaacccatccagcgtctgtggttgcaatccatgacccaggcggccatccgt
gaggcgttcgagaatctgcgcgacgacgtgcaactcaagccgctggaggccgctgcccgc
tcgcgcgccgaggccgactggctggtgggcatcaacggcacgcgcgccatgacggccttc
aacagcaaggacggcggctttttcaagaccccggtcggccgcgtgcaaacgccgacactg
gccatcgttgccgagcgcgaaaatcgcatccgcagcttcgtctcgcgtgactactgggag
gtgcacgccaccttcgtggccgccgccgggctgtacgaagggcgctggatcgatccggac
ttcaagaaggacgagcgcgaccccgaaaagcgtgaatcccgcctgtggtcgcaggccgcc
gcacaaagtgtcgtggccgcttgccgcgcgcaatccggccaggtaaccgaggagtccaag
ccttcgacccagatgtcgccggcgctctacgatctgacctccttgcagcgcgaggccaac
ggccgtttcggcttctcggccaagaccacgctggccctggctcagacgctttacgagcgg
cacaaagccctgacgtatccgcgtaccgattcccgctatctgcccgaggattacctcaac
accgtgcggcaaaccatgcgtgccctggccgaaggcggctcgcacgccgtcggcggcttg
tcgcgccatgccggcacggtggtcagcaacgactgggtcaagcccaatcgccgcatcttc
gacaacaagaaggtgtcggatcactttgccatcattccgacgctgcagatcccgcatgat
ctgagcgaggccgaaggcaagatttacgacctggtcctcaagcgctttctggccgtgttc
ttcccggctgccgaataccgggtcaccacccgcctgacgcaagtgcagggccaccgcttc
aaaaccgacggcaaggtcctcgtgtcgcccggctggctggccgtctatggcaaggaagct
cagggcgaagacgccaatctggtgccggtagccgacggggaaaccgtacgtaccgaagag
gtgcgcgccgaggcgctggccaccaagccgccggcacgctacaacgaagccacgctgcta
tcggccatggaaggcgcgggcaagctggtcgacgacgaagagttgcgcgaagccatgtcc
gagcgcggtctgggtacgccagcgacccgcgcggccatcatcgaaggcctgctcaacgaa
agctatctgcgacgcgaaggccgtgagctggtgcccacggccaaagcacgccagctcatg
acactgctctcgggtctggacgtcaccgaactgacctcgcccgaactgaccggcgaatgg
gagcacaagctcaagcagatcgagcagggcggcctgaaccgcgaagctttcatgcgcgaa
atcgcgcaaatgacgcaggtcatcgtcaagcgcgccaaggaatacgagcgcgataccgtg
cccggcgattacgctactttgcaaacgccatgtccgaaatgcggcggcgtggtcaaggag
aactatcgtcgctttgcctgcacgcaatgcgatttttcgatcagcaagcatccgggcgga
cgcaccttcgaattgcccgaggtcgaagagttgctggccaaacgcgaaatcggtcctctg
caaggcttcatcagcaaaatgggccggccgtttgcggccatcctgcgcatcagcgatgaa
tacaaactcgagttcgactttggccagaacgacgaagacgacaacgagccggtggatttc
agcggccatacgcctgtcggcgcgtgcccgaagtgctccgcccgcgtcttcgagcatggc
atgagctatgtctgcgaaaagtccgtcggcccgcagaagacctgcgacttccgctccggc
aaggtcatcctgcaacaggagatctcgcgcgagcaaatgagcaagcttctggctgacggc
cgcagcgatctgctcgacggcttcgtctccagccgcacgaatcgtaagttcaaggccttc
ctcgtgcgccagcctgacggcaagatcggattcgagttcgagccacgcggcgacaagccg
gcgcgtggcgcagccaaaacggcgggcaagacagctgctaagacggctaccaaaacagca
accaaaacggcagccaaaacggcagccaagaaagcgcccgccaagaaaacagccgtcaag
aaaacagccaccaagaccgctgtcaaaaaggcggccgccaagaaaacagccggctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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