KEGG T03052: D560

Bordetella holmesii ATCC 51541: D560_2480

Entry

D560_2480         CDS       T03052

Symbol

gyrA

Name

(GenBank) DNA gyrase, A subunit

K02469

DNA gyrase subunit A [EC:5.6.2.2]

Organism

bho Bordetella holmesii ATCC 51541

Brite

KEGG Orthology (KO) [BR:bho00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bho03032]
    D560_2480 (gyrA)
   03400 DNA repair and recombination proteins [BR:bho03400]
    D560_2480 (gyrA)
Enzymes [BR:bho01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     D560_2480 (gyrA)
DNA replication proteins [BR:bho03032]
Prokaryotic type
  DNA Topoisomerases
   D560_2480 (gyrA)
DNA repair and recombination proteins [BR:bho03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      D560_2480 (gyrA)

SSDB

Motif

Pfam:

DNA_topoisoIV DNA_gyraseA_C

Other DBs

NCBI-ProteinID:

AHV94860

Position

2322982..2325492

AA seq 836 aa
MHRRVLYAMHELNNDWNRAYKKSARIVGDVIGKYHPHGDQSVYDTIVRMAQDFSMRYMLV
DGQGNFGSIDGDNAAAMRYTEIRLAKIAHELLADIDQETVDFGPNYDGSEQEPLLLPSRL
PNLLVNGSSGIAVGMATNIPPHNLGEVVEGCLYCLRNPECTIDELLEIIPAPDFPTGGII
YGMSGVREGYRTGRGRVIMRAKTHFEDMEKGNRQAIVVDAIPYQVNKKTLQERIAELVND
KKIEGISDIRDESDKDGMRLVIELKRGEVPEVVLNNLYKNTQLQDTFGMNLVALVDGQPR
LLNLKQLIDYFLQHRREVVTRRTVFQLRKARERGHVLEGLAVALANIDDFIAIIKAAPTP
PVARQELMARAWDSSLVREMLARADGGEVAGGRHAFRPDDLPEGFGLQGDGQYRLSETQA
QEILNMRLQRLTGLEQDKIIGEYKEVMDTIADLLDILARPERITTIIGDELQAIKAEFST
AAKDSRRSEIEFNATELDTEDLITPMDMVVTMSHGGYIKSQPLSEYRSQKRGGRGKQATQ
MKENDWVDQLFIANTHDYLLCFSNRGRVYWLKVWEVPQGTRNSRGKPIVNMFPLADGEKI
TVVLPVKEFSEDHYVFMATSRGTVKKTALSDFSNPRKAGIIAVDLDDGDYLIGADVTDGK
HDVMLFSDAGKAVRFDENDVRPMGRAARGVRGMMLEDSQTVIALLVAGDESQSVLTATEN
GYGKRTSIAEYTRHGRGTKGMIAIQTSSRNGKVVGAVLVNPSDEIMLITTGGVLVRTRVS
EIREMGRATQGVTLISVDDGSSLSGVRRVVESDADDDESAEDDGEGQIDSTEEPTE

NT seq 2511 nt +upstreamnt +downstreamnt
gtgcaccggcgcgtgctgtacgcgatgcacgagttgaacaacgactggaatcgcgcctac
aagaagtccgcccgtatcgtgggcgatgtcatcggtaagtatcacccccacggcgatcag
tccgtctacgacaccatcgttcgcatggcgcaggatttttccatgcgctatatgctggtc
gacgggcagggcaacttcggctcgatcgacggcgataacgccgcggcgatgcgctatacc
gaaatccgcctggccaagatcgcgcacgagctgcttgccgatatcgaccaggaaaccgtc
gatttcgggcccaactatgacggcagcgagcaggaacccttgctgttgccgtcgcgcctg
cccaatctgctggtcaatggcagctccggcattgccgtgggcatggcaaccaacatcccg
ccgcataatctgggcgaagtggtcgagggctgcctgtactgcctgcgcaaccccgagtgc
accatcgacgagttgctcgagatcatcccggctccggatttccccacgggcggcatcatc
tacgggatgtctggtgtgcgcgaaggctatcgcaccggccgcggccgcgtcatcatgcgt
gccaagacgcacttcgaggacatggaaaagggcaaccgtcaggccatcgtggtcgacgcg
attccctaccaggtcaacaagaagacgctgcaagagcgcattgccgagctggtcaacgac
aaaaaaatcgagggtatctcggatatccgcgacgagtcggacaaagatggcatgcgtttg
gtcatcgagctcaagcgcggtgaagtgcccgaggttgtgctcaataatctgtacaagaac
acgcagctgcaggataccttcgggatgaacctggtggcgctggtcgatggccagccgcgc
ctgctcaatctcaagcagctgatcgactacttcctgcagcaccgccgtgaagtcgtcacg
cgtcgtacggtgttccagttgcgcaaggcccgcgagcgcgggcacgtactggaaggcctg
gcggtggcgctggccaatatcgatgacttcattgccatcatcaaggccgcgcccaccccg
ccggtggcgcgccaggaactgatggcgcgggcctgggattcttcgctggtgcgcgaaatg
ctcgcccgagccgacggcggcgaggttgccggcggacggcatgccttccgcccggacgat
ctgcccgagggcttcggcctgcagggtgatgggcaatatcgcctgtcggagacgcaagcg
caggaaatcctgaacatgcgtctgcagcgcctgaccgggcttgagcaggacaagatcatc
ggcgagtacaaagaggtgatggacaccatcgccgatctgctcgacatcctggcccgtccc
gaacgtatcaccaccatcatcggcgacgagttgcaggcgatcaaggcggagttctccacg
gcggcgaaggacagccgccgctccgagatcgagttcaacgccaccgagctggatactgaa
gacctgatcaccccgatggacatggtggtgaccatgtcgcacggtggctatatcaagagc
cagccgctgtctgagtaccggtcgcaaaaacgcggcggccgaggcaagcaggcaacgcag
atgaaggaaaacgactgggtcgatcagctcttcatcgccaacacgcacgactatctgctg
tgcttctctaaccgtggccgcgtgtattggctcaaggtctgggaagtgccgcaaggcacg
cgcaattcgcgcggcaaacccatcgtcaatatgttcccgctggccgacggcgagaagatc
accgtggtgctgccggtcaaggaattcagcgaagatcactatgtcttcatggcgacctct
cgtggcacggtcaagaagacggcattgtcggatttctccaatccgcgcaaggccggcatc
attgccgttgatctggatgacggcgactacctgatcggtgcagacgtgaccgatggcaag
catgatgtcatgctgttctcggatgccggcaaggccgtgcgcttcgatgaaaacgatgtc
cggcccatgggtcgcgccgcgcgtggcgtgcgcggcatgatgctcgaagacagccagacc
gtgattgcgttgctggtggccggcgacgaaagccagagcgtgctgaccgccacggaaaac
ggctatggcaagcgtacgtcgatcgccgagtacacccggcatgggcgcggcaccaagggc
atgatcgccatccagaccagttcgcgcaatggcaaggtcgttggcgccgtgctggtcaat
ccgagcgacgaaatcatgctgatcaccacgggcggtgtgctggtgcgcacccgcgtgagc
gaaatccgtgaaatgggccgagccacgcagggcgtgacgctgatcagcgtcgatgacggc
agctcgctgtcgggcgtgcgtcgcgtggtggaaagcgatgccgacgatgacgagtccgca
gaggacgacggcgaaggccagatcgattcgactgaagaacctacggagtaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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