KEGG   Bordetella hinzii: ACR54_03436
Entry
ACR54_03436       CDS       T04004                                 
Symbol
hfq
Name
(GenBank) RNA-binding protein Hfq
  KO
K03666  host factor-I protein
Organism
bhz  Bordetella hinzii
Pathway
bhz02024  Quorum sensing
bhz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bhz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ACR54_03436 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    ACR54_03436 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bhz03019]
    ACR54_03436 (hfq)
   03036 Chromosome and associated proteins [BR:bhz03036]
    ACR54_03436 (hfq)
Messenger RNA biogenesis [BR:bhz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     ACR54_03436 (hfq)
Chromosome and associated proteins [BR:bhz03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    ACR54_03436 (hfq)
SSDB
Motif
Pfam: Hfq LSM SRP14
Other DBs
NCBI-ProteinID: AKQ56733
UniProt: A0A0H4X1H9
Position
complement(3579096..3579332)
AA seq 78 aa
MSNKGQTLQDPFLNTLRKEHVPVSIYLVNGIKLQGQIESFDQYVVLLRNTVTQMVYKHAI
STVVPARAVNFQVEVPAE
NT seq 237 nt   +upstreamnt  +downstreamnt
atgagcaataaagggcaaactttgcaagatccgtttctgaacacgctgcgcaaggaacac
gtgccggtgtcgatctatctggtaaacggcatcaagcttcaggggcagatcgaatctttt
gatcagtatgttgtgctcttgcgcaacaccgttacccagatggtctacaagcacgccatc
tccaccgtcgttccggcccgcgcagtcaactttcaggtggaagttcccgctgaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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