KEGG   Bradyrhizobium icense: LMTR13_19960
Entry
LMTR13_19960      CDS       T04485                                 
Name
(GenBank) ribosomal protein S12 methylthiotransferase
  KO
K14441  ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
Organism
bic  Bradyrhizobium icense
Brite
KEGG Orthology (KO) [BR:bic00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bic03009]
    LMTR13_19960
Enzymes [BR:bic01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.4  [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
     LMTR13_19960
Ribosome biogenesis [BR:bic03009]
 Prokaryotic type
  ribosomal protein modification factors
   LMTR13_19960
SSDB
Motif
Pfam: Radical_SAM UPF0004 TRAM_2 NTPase_1 TRAM CLP1_P
Other DBs
NCBI-ProteinID: ANW02107
UniProt: A0A1B1UH64
Position
complement(4236225..4237550)
AA seq 441 aa
MQQAAAPKISFVSLGCPKALVDSERIITRLRAEGYELARKHDGADIVIVNTCGFLDSAKQ
ESLGAIGEAMAENGKVIVTGCMGAEPEQIEAAYPGVLSISGPQQYESVLEAVHRALPPVH
NPHLDLVPPQGVKLTPRHYAYLKISEGCNNRCSFCIIPRLRGDLVSRPANDVLREAERLV
AAGVKELLVISQDTSAYGVDVKYAESSWKDRQVRAKFFDLAKELGELGAWVRLQYVYPYP
HVDEVIGLMTEGKILPYLDIPFQHASPDVLKAMKRPAAQEKTLARIQKWREECPDLTLRS
TFIVGFPGETDSDFAYLLDWLEEAEIDRLGCFKYEPVAGAASNAIGNAVPDEVKQERWNA
LMARQQKISARRLKRKVGTRQQIIVDEVGPTVAKGRSKADAPQIDGAVYLSSRRPLKVGE
IVTAKIERADQYDLHGSVAGF
NT seq 1326 nt   +upstreamnt  +downstreamnt
atgcaacaggccgctgcgcccaagatcagctttgtttcgcttgggtgccccaaggcgctg
gtggattccgagcgcattatcacccggctacgcgctgaaggctatgagctggcccgaaag
catgacggcgccgacatcgtgatcgtcaacacctgcggcttcctcgacagcgccaagcag
gaatcgctcggcgccatcggcgaggccatggcggagaacgggaaggtcatcgtcaccggc
tgcatgggcgcggaacccgagcagatcgaggcggcctatccgggcgtgctctcgatatcg
ggcccgcagcaatatgagagcgtgctggaggctgtgcaccgggccctgccgccggtccat
aatccgcacctcgatctggtgccgccacagggcgtcaagctgacgccgcgccactacgcc
tatttgaaaatttccgaaggctgcaacaatcgctgcagcttctgcatcatcccaagactg
cgcggcgacctggtgtcgcgtccggccaacgacgtgctgcgcgaggcagaaaggcttgtc
gcagccggcgttaaggagttgctcgttatctcgcaggacacgtcggcgtatggcgtggac
gtgaagtacgcggagagttcgtggaaggaccgtcaggtccgcgccaaattcttcgacctc
gccaaggaactcggcgaactcggcgcctgggtgcggctgcaatatgtctacccctacccg
catgtcgacgaagtcatcggcctgatgacggagggcaagatcctgccctatctcgatatt
cccttccagcatgcgagcccggacgtcctgaaagccatgaagcgtcccgccgcgcaggag
aagacgctggcgcggatccagaagtggcgcgaggaatgtcctgacctgacgctgcgctcc
accttcatcgtcggtttccccggcgagaccgattccgattttgcttatttgctcgactgg
cttgaagaggccgagatcgatcgcctcggctgcttcaaatacgagccagtcgcgggtgct
gcatcgaatgcgatcggaaatgccgtgcctgatgaggtgaagcaggagcgctggaacgcg
ctgatggcgcggcagcagaagatctccgcccgtcgtctcaagcgcaaggtcggcaccagg
cagcagatcatcgtcgacgaagtcgggccgacggtcgcaaagggtcgttcaaaggccgac
gcgccgcagatcgatggcgcagtctatctctccagccgccgcccgctgaaggtcggcgag
atcgtgaccgcgaagatcgagcgcgccgatcaatacgacttgcacggcagcgtcgccgga
ttttga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (25)   

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