KEGG   Beijerinckia indica: Bind_0452Help
Entry
Bind_0452         CDS       T00688                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
bid  Beijerinckia indica
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:bid00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Bind_0452
Enzymes [BR:bid01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Bind_0452
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Bind_0452
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
508434..509300
Genome map
AA seq 288 aa AA seqDB search
MPELPEVETVRRGLAPVMVGASFTTVEQRRADLRFPFPDNFAARLEGRRVEALGRRAKYL
LADLDDAQVLVMHLGMSGSFRIEKAGDLASPPPGKNAAHDHVVFGLSTGTRIIYNDPRRF
GFMHLIARQDLAGHPLFRNVGIEPLGNELEGALLARLFAGKTTPLKTALLDQTLIAGLGN
IYVCEALHRAGLSPRRAAGTLAGKKGQPTERAHRLSEIIRAVLEEAIEAGGSSLRDHRQA
DGALGYFQHRFRVYDREAEPCPREGCGGTIKRIVQAGRSTFFCAKCQR
NT seq 867 nt NT seq  +upstreamnt  +downstreamnt
atgcccgaattgcctgaagtcgaaaccgtccgccgggggctggcgccggtcatggtcggg
gcttccttcacgactgtagagcagcgacgggccgatcttcgctttccctttccggacaat
ttcgcggctcgccttgagggtcgccgtgtggaagcgctcggccgccgcgccaaatatctg
ctcgccgatctcgatgatgcgcaagtgctggtcatgcatctcggcatgtccggttcgttt
cgcatcgagaaggcgggcgatctcgcctccccgcctcctggcaagaacgctgcgcatgat
catgtggtcttcgggctttcgacgggcacgcgcatcatttacaatgatccacgccgtttc
ggtttcatgcatttgatcgcgcgccaggacctggcggggcatcctttgttccgcaatgtc
ggcatcgagccgctcggcaatgagctcgaaggggccttgctggcgcgattgtttgcaggc
aagacgacgccgctcaagaccgcgctgctcgatcagaccctgattgccggcctcggcaat
atttatgtatgcgaggctttgcaccgggcggggctttcaccgcgccgggcggcggggacg
ctcgccggcaagaagggccagccgacagagcgcgcgcatcgtctttccgaaatcatccgc
gcggttttggaagaagcgatcgaggcgggcggttcatccttgcgcgatcatcgccaagcc
gatggcgcgctcggctatttccagcaccgtttccgtgtctatgatcgggaagcagagccc
tgcccgcgagaggggtgtggtggcacgatcaagcgtatcgtgcaggccggacgatcgacg
ttcttttgtgccaaatgccagcggtga

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