KEGG B.indica: Bind

Beijerinckia indica: Bind_1811

Entry

Bind_1811 CDS B.indica

Definition 1-deoxy-D-xylulose-5-phosphate synthase

Orthology K01662 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]

Pathway bid00900 Terpenoid backbone biosynthesis
bid01100 Metabolic pathways

Class Metabolism; Biosynthesis of Secondary Metabolites; Terpenoid
backbone biosynthesis [PATH:bid00900]

SSDB

Motif Pfam: Transket_pyr Transketolase_C E1_dh Transketolase_N
TPP_enzyme_C DUF1194
PROSITE: TRANSKETOLASE_2 TRANSKETOLASE_1

Other DBs NCBI-GI: 182678782
NCBI-GeneID: 6201246
JGI: Bind1811
UniProt: B2IDK3

Position 2059384..2061312

AA seq 642 aa
MRTDSKTPLLDTIATPTDLRRLKESDLAQLADELRTETIDAVSVTGGHLGAGLGVVELTV
ALHYVFDTPHDRLIWDVGHQAYPHKILTGRRDRIRTLRRAGGLSGFTKRSESVYDPFGTA
HSSTSISAGLGMAAATTLSGGNNNVIAVIGDGSMSAGMAYEAMNNAGAMHSRLIIILNDN
EMSIAPPAGALSAYLARLVSGGTYRTVREAAKQLGRHLPHFIYDRARKTEEFARNFWAGG
TMFEELGIYYVGPIDGHNLDHLLPVLKNVRDFKETGPILVHVVTQKGKGYAPAAAASDKY
HSVNTFDVVTGVQTKPKANAPSYTRVFADALVKEAERDDKIVAITAAMPGGTGLDVFGKA
FPERTFDVGIAEQHAVTFAAGLATEGYRPFCALYSTFLQRGYDQVVHDVAIQNLPVRFAI
DRAGLVGADGATHAGSFDVSYLGILPNMVIMAAADEAELVHMVATAAAYDEGPIAFRYPR
GEGVGIELPQIGEILDIGRGRIVREGTTVALLSLGTRLAEASKAAEQLASYGISVTVADA
RFAKPLDLDLVRRLAKNHEVLITIEEGSVGGFGSFVMQALAEEGLLDGTGLKFRSMVLPD
TFLDHDKPEKLYAQAGLDAKGIVAKVLATLGRENEAHQSLIA

NT seq 1929 nt +upstreamnt +downstreamnt
gtgaggacagattcgaagactccccttctcgatacgatcgccactcccacagatctccgc
cgtttgaaggaatcggacctggcgcagctcgctgatgagttgcgtactgagacgattgat
gcggtttcggtcacgggtggccatctcggcgccggtctcggcgtcgtcgagttgacagtc
gccctgcattacgtttttgacacaccgcacgatcggctgatctgggacgtcggtcatcag
gcctatccgcacaagattctgacgggacggcgtgaccggattcgcacgctgcggcgtgca
ggcggattgtctggattcaccaaacggtccgaaagcgtttatgatcccttcggcaccgct
cattcctcgacgtcgatctccgctggtctcggcatggcagcggcgaccacgctttcgggt
ggcaataataatgttatcgccgtgattggcgacggctccatgtcagccggcatggcctat
gaggccatgaataatgccggcgccatgcattcccgtctcattatcattttgaatgataat
gaaatgtcgatcgctccgccggcaggagcgctttccgcttatctcgctcgccttgtctcg
ggcggcacctatcgcacggttcgcgaagccgccaagcagcttggccggcatttgccgcat
ttcatttatgaccgcgcccgcaaaaccgaggaattcgcccggaacttctgggccggcggc
acgatgttcgaggagcttggcatctattatgtcggcccgatcgacggtcataatctcgac
catctgctgcccgtcctgaaaaatgtccgcgatttcaaggaaacgggacccattctcgtc
catgtcgtgacgcaaaagggcaagggctatgcgccggccgccgcggcgagcgacaaatat
cacagcgtcaataccttcgacgtcgtcaccggtgtccagaccaagcccaaggccaacgcg
ccgtcttatacgcgcgtctttgccgatgccctggtcaaggaggccgagcgcgacgacaag
atcgtggcgatcaccgccgccatgccggggggcactggcctcgacgtgtttggcaaagcc
tttcctgagcgcacattcgacgtcggcattgccgagcagcatgccgtgaccttcgcggct
ggtctcgcgaccgaaggctatcgccccttctgcgccctgtattccaccttccttcagcgc
ggctatgatcaggtcgtgcatgatgtggcgatacagaatctgcctgttcgcttcgccatc
gaccgcgcaggcctcgtcggcgccgatggcgcgacccatgcgggttcgttcgatgtgtcc
tatctcggcattttgccgaatatggtgatcatggccgccgccgatgaagcggagctcgtc
catatggtcgcgacggccgccgcctatgatgaaggcccaatcgctttccgttatccacgt
ggcgagggtgtcggcatcgaattgccgcaaatcggcgaaattctcgatatcggccgtggc
cgtatcgtgcgggaaggcacgacggtagccctcctgtcgctcgggacgcgccttgcggaa
gcctcaaaggcggcggagcaattggcgagctatggcatttccgtcacggtcgccgatgcg
cgtttcgccaagcccctcgatctcgatctcgtgcggcggctcgccaagaatcatgaggtt
ttgatcaccatcgaggaaggcagcgtcggcggtttcggttccttcgtcatgcaggccctg
gccgaggaaggcttgctggatggaacgggtctcaaattccgctccatggttctgcctgac
acgttcctcgatcacgacaagccggaaaagctctatgcccaggccggcctcgacgccaag
ggcattgtggccaaggttctcgcgacgctgggacgcgagaacgaagcccatcaaagcctg
attgcctga

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JGI-BID (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (6)   
   PROSITE (2)   
All databases (21)

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