KEGG   Bacillus infantis: N288_00140
Entry
N288_00140        CDS       T02860                                 
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
bif  Bacillus infantis
Pathway
bif03030  DNA replication
bif03430  Mismatch repair
bif03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bif00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    N288_00140
   03430 Mismatch repair
    N288_00140
   03440 Homologous recombination
    N288_00140
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bif03032]
    N288_00140
   03400 DNA repair and recombination proteins [BR:bif03400]
    N288_00140
Enzymes [BR:bif01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     N288_00140
DNA replication proteins [BR:bif03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     N288_00140
DNA repair and recombination proteins [BR:bif03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     N288_00140
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 AAA RuvB_N AAA_30 AAA_22 AAA_19 TIP49 AAA_16 AAA_assoc_2 DnaX_C Rad17 AAA_7 PIF1 Mg_chelatase AAA_18 AAA_24 DUF815 nSTAND3 AAA_14 TsaE AAA_28 FlxA Striatin
Other DBs
NCBI-ProteinID: AGX02069
UniProt: U5L437
Position
29599..31293
AA seq 564 aa
MSYQALYRVWRPQQFIDVVGQEHVTKTLQNALLQQKASHAYLFSGPRGTGKTSAAKILAK
TVNCERAPISEPCNECDSCIGITNGSIPDVIEIDAASNNGVEEIRDIRDKVKYAPSAVKY
KVYIVDEVHMLSIGAFNALLKTLEEPPKHVMFILATTEPHKIPLTIISRCQRFDFKRITA
QSIVGRMKMIVDETGVQYEENALHIVARAAEGGMRDALSLLDQAISFSQDKVTAEDALTV
TGAVSQGFLNKLSRNVMEKDAAGALEALETLLFQGKDPSRFIEDFILYYRDMLLYKAAPS
LDESLERVMLDEEFKALAEEIDPQQLYSLIEILNKAQQEMRWTNHPRIFLEVAIMKLCQL
EGTEKKAAADIEPLMRKIEQLQEELAELKKNGVTVSGAAEPAQKKQAQRTSRKGFQAPEG
KINEILKNATKNDLNAVKGKWGDMLGRLVHNQMRSQAALLNEAEPVAASADAFIVKFKYE
IHCQMAMDNAKFIETISGAIQELTGQRKQVVGVPEEQWQRIRGSFLNSGHRDEPSEGSGL
GAPEDDLVVSEAQKLFGDLVEIKE
NT seq 1695 nt   +upstreamnt  +downstreamnt
atgagttaccaggcattatatcgtgtctggcgtccacagcagttcatagatgttgtaggg
caggaacacgtaaccaaaacattgcagaacgccctgcttcagcagaaagcctctcatgca
tacttattttccgggcccagggggacgggaaagacgagtgcggccaaaatactggccaaa
accgtcaactgtgaaagggctccgatcagcgagccttgcaatgagtgtgattcctgcatt
ggcattacgaatggctccataccggacgtgattgaaatcgatgcggcctccaacaacggt
gtggaagagattcgggatattagggacaaagtcaaatatgcacccagtgcagtcaaatat
aaagtatatatcgtcgatgaggttcatatgctttcgatcggcgccttcaatgcactatta
aaaacacttgaagagcctccgaagcatgttatgttcattcttgctacaacagaaccccac
aagattccgctcaccatcatttcaagatgccagcgctttgacttcaagcgcataacggca
cagtcgatcgtcggccggatgaaaatgatagtggatgagaccggggtgcagtatgaagag
aatgccctccatatcgttgcccgggctgccgagggagggatgagggatgctctcagcctc
cttgatcaggcgatatccttcagccaggacaaagtgacggcggaggatgccctcacagta
acaggagccgtttcccagggattcctgaataaactgtccagaaacgtcatggaaaaagat
gctgcaggtgcgctggaagcactggagaccctcctgtttcaggggaaggatccttccagg
ttcatcgaggacttcatcttatattacagggacatgcttttatacaaggcagctccttca
ctggatgagtcgctcgaacgcgtcatgcttgatgaagaattcaaggcattggctgaagag
attgatcctcagcagctgtacagcctgattgaaattctgaataaagcccagcaggaaatg
cgctggaccaaccatccaaggattttccttgaggtagccatcatgaagctctgccagctt
gagggtacagagaaaaaggcggctgccgatattgaacctctcatgagaaaaatcgaacag
cttcaagaggagctggctgagctgaagaaaaatggggtcaccgtttcgggtgcggctgag
cctgcccagaagaagcaggcacagagaacctcaagaaaaggattccaggcgcctgaaggg
aaaattaatgaaatcctgaaaaatgcaacgaaaaatgacctgaatgccgtaaagggcaaa
tggggcgatatgctgggaaggctcgtgcataaccagatgcggtcccaggccgctctgctg
aatgaagcagagccggtcgctgcttcagcggatgcgttcatcgttaaatttaaatatgaa
atacactgtcaaatggccatggataatgctaaatttatagaaacgatatccggtgccatc
caggaattgaccggacaaaggaaacaggttgtcggggtgcctgaagagcagtggcagcgg
atacggggcagttttctgaacagcgggcatcgcgatgagccttctgaaggcagcgggctt
ggcgccccggaagacgacctggtcgtatccgaagcacaaaagctgttcggggatttagtc
gaaatcaaagaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (24)   
   Pfam (24)   
All databases (37)   

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