KEGG   Bacillus infantis: N288_18765
Entry
N288_18765        CDS       T02860                                 
Name
(GenBank) hypothetical protein
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
bif  Bacillus infantis
Pathway
bif03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bif00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    N288_18765
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bif03400]
    N288_18765
Enzymes [BR:bif01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     N288_18765
DNA repair and recombination proteins [BR:bif03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     N288_18765
SSDB
Motif
Pfam: AAA_19 AAA_30 HHH_4 SH3_13 UvrD_C_2 Viral_helicase1 AAA_11 UvrD-helicase AAA_12 AAA_22 nSTAND3 AAA_16 AAA_18 AAA_28 NTPase_1 AAA T2SSE AAA_17 HHH_5 DUF4926 TsaE AAA_5
Other DBs
NCBI-ProteinID: AGX05631
UniProt: U5LG21
Position
complement(3422920..3425340)
AA seq 806 aa
MEKQDSLDLFAEQGKFIKGKHLVTIFHNESNLYTVLRIRVEETNHEYDDKEAVITGYFPK
VHDHESYIFYGEFKEHPKFGLQFLANHFRKDIPQTKQGVVGYLSGELFKGIGKKTAESIV
DKLGENAISRILNQPSLLDEIPKLPSEKAKLLYDTLMEHQGLEQAMIALNQYGFGPQLSM
KIYQMYKDETVQLLQTNPYKLVEDIEGIGFGRADELGYQLGISGSHPDRIKAACLYILET
ESMQNGNVYVHARTLLEKARSLLEENKRDQIEYSSISQEVIKLEEEGKIMAEDKRIYLPS
LYFAEKGLVTSIKRLLQQTEYDEQFPESEFLLALGSLEERIGVQYAPSQKEAIQTALMSP
MLILTGGPGTGKTTVIKGIVELYAELHGCSLEPKDYKKEEPFPFLLAAPTGRAAKRMSES
TGLPAVTIHRLLGWNGTEGFDHHEDNPLEGKILIVDETSMVDIWLANKLFKALPENIQVI
LVGDEDQLPSVGPGQVLKDLLLSEKVPTVRLTDIYRQAEGSSIIELAHEIKKGGLPDDIA
VQQADRSFLKCSPAQIADVVEKVVLNARKKGYRSRDIQVLAPMYRGPAGIDNLNKILQEI
LNPNPDGTRKELSFGDVKYRVGDKVLQLVNQPENNVFNGDMGEIVSVFYAKENTEKQDMI
VVSFDGNEATYTRQDLSQITLAYCCSVHKSQGSEFPIVIMPIVRSYYRMLRRNLIYTAIT
RSRQFLILCGEESALRSGVQRAEEQARLTSLTKRLQDALGEAPEQTGQEEAGEEAEEVPY
EVKLMNADPMIGMGSITPYDFLEEKA
NT seq 2421 nt   +upstreamnt  +downstreamnt
atggagaagcaggattctctggatctttttgccgaacagggcaaattcatcaaagggaag
catcttgtgactatttttcataatgaatcaaatctatatacagtgctccggatccgggtg
gaagagacgaatcatgaatatgacgacaaggaagctgtcatcacaggctatttcccgaag
gtgcatgaccatgaatcgtatattttctatggggaattcaaggagcacccgaaattcggc
cttcaattcctggcgaatcatttccgaaaggatatcccccagaccaagcagggcgtagta
ggctatctttccggcgagctttttaaaggcatcgggaaaaagacggcagaatctatcgta
gataaacttggggagaatgcgatttccagaatcctcaaccagccctccctcctggacgag
atcccgaaactaccttctgaaaaagcaaagctcctttacgacacacttatggagcatcag
ggtctggaacaggcaatgattgcactgaatcaatatggcttcggcccccagctgagcatg
aagatttatcagatgtacaaggatgagacggtccagcttctgcagaccaatccatacaag
ctggttgaggatattgaaggcatcggcttcggcagggcggatgagcttggctaccagctt
ggcatttcaggaagccatcctgaccgcatcaaggcggcatgcctgtatatcctggaaaca
gaaagcatgcagaacggaaatgtttatgtgcatgcccgcaccctcctggaaaaagccagg
tcgcttcttgaggaaaataaaagagatcagatagaatacagctccatctcccaggaagtt
atcaagctcgaagaagaaggcaagatcatggcagaagataaacggatttatctgccctca
ctttattttgctgaaaaggggcttgtaacgagcatcaagcggctgctgcagcagaccgag
tatgatgaacaattccctgagtcggagttcctgcttgcccttggcagccttgaggaaagg
ataggtgtgcagtacgccccttcgcaaaaagaagcaatccagaccgctctgatgagtccc
atgcttatcctgacggggggaccgggaacgggaaagacaacagtcatcaaaggtatagtc
gaactgtacgctgagctgcatggctgctcactggaaccgaaggattataaaaaggaagag
cctttcccgttcctcctggccgccccgacaggaagggccgccaagcggatgtccgaatcg
accggccttcctgctgtaacgatccacaggctgctcggctggaatggaacggaaggcttt
gaccaccatgaagacaatccgctggaagggaaaatcctgatagtcgatgaaacctccatg
gtagacatctggctggcgaacaagctgttcaaggctttgccggaaaacatccaggtcatc
ctggtaggagatgaagaccagttgccttcagtcggacccggccaggtgctgaaggatctg
cttctttcagaaaaagtgcccactgtcaggctgacagatatttaccggcaggcagaaggc
tcatccatcattgagctggcgcacgaaatcaaaaaaggcggtcttcctgatgatatcgcg
gtccagcaggccgacagatcattccttaagtgcagccctgcccagattgccgatgtggtt
gaaaaggtagtcctgaatgccaggaaaaaaggctacaggtccagggatattcaggttctc
gctcccatgtacagggggccggcaggaattgataatctgaataagatccttcaggaaatt
ttaaaccccaatcctgatggcaccaggaaggagctatctttcggtgatgtgaaatacagg
gtgggcgataaggtcctacagctggtcaaccagccggaaaataacgtatttaacggcgat
atgggcgaaattgtatctgtcttctatgcaaaggaaaataccgaaaagcaggatatgatc
gttgtttcttttgatggtaacgaagcaacctatacaaggcaggacctcagccagattacg
cttgcctactgctgctctgtccataaatcacagggaagtgagtttccgattgtcattatg
ccgatcgtccggagctattaccgcatgctcagaaggaacctgatttatacagccattacg
agaagcagacagtttctcatcctttgcggtgaagaatcagcgctgagatccggggtgcag
agggcggaagagcaggcaaggctgacttccctgacaaaacggcttcaggatgcacttggg
gaagctccagagcagacaggccaggaagaagcaggcgaagaagccgaagaggttccatac
gaagtaaagctcatgaatgcagatcccatgataggcatgggatccatcactccttatgac
tttttggaagagaaagcataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (22)   
   Pfam (22)   
All databases (32)   

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