KEGG   Bacillus infantis: N288_19380
Entry
N288_19380        CDS       T02860                                 
Name
(GenBank) excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
bif  Bacillus infantis
Pathway
bif03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bif00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    N288_19380
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bif03400]
    N288_19380
DNA repair and recombination proteins [BR:bif03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     N288_19380
SSDB
Motif
Pfam: UvrC_RNaseH_dom UVR GIY-YIG HHH_5 HHH_2 GIY_YIG_2
Other DBs
NCBI-ProteinID: AGX05753
UniProt: U5LEC8
Position
complement(3554817..3556589)
AA seq 590 aa
MNERIKNKLMLLPDQPGCYLMKDRQATVIYVGKAKVLKNRVRSYFTGSHDGKTLRLVNEI
EDFEYIVTSSDMEALILEMNLIKKYDPKYNVMLKDDKSYPFIKLTAERHPRLITTRNVKK
DKGKYFGPYPNVQAANETKKLLDRIYPLRKCSTLPDRVCLYYHMGQCLAPCVKPVSEKQY
KDIVDEIARFLNGGYKDIKKELTVKMTAAAEELDFERAKELRDQIAHIEATMEKQKMTST
DFTDRDVFGFAVDKGWMCVQVFFIRQGKLIERDVSLFPVYGEPEEEMLTFMGQFYTKANH
FKPREILVPDTVNEEMAEKLLEVKVLKPQRGQKKDLVKLAGKNARIALQEKFSLIERDEE
RTIKAVENLGRQLGIYTPHRIEAFDNSNIQGTDPVSAMIVFIDGKPEKREYRKYKIKTVK
GPDDYESMREAVRRRYTRVLKEGLPIPDLIIVDGGKGHIESVRDVLENELGLDIPISGLA
KDEKHRTSQLLYGNPLEIIPLERNSQEFYLLQRIQDEVHRFAITFHRQLRGKSAFQSLLD
DIPGIGEKRKKLLLKTFGSVKKMKEAGLDEFTAIGIPANVAQELKNKLSE
NT seq 1773 nt   +upstreamnt  +downstreamnt
atgaacgaaagaatcaagaataagctgatgctgctgccggaccagccaggctgctacctt
atgaaggacaggcaggctaccgtgatttacgttgggaaagcaaaggtactgaagaaccga
gtccgctcttactttaccggttcacatgacggcaaaacgctccgccttgtaaatgaaatt
gaggatttcgaatatattgtcacatcatcagatatggaagccctcattcttgaaatgaac
ctgatcaaaaagtatgatccaaaatacaatgtcatgctgaaggacgacaaaagctacccg
ttcatcaagctgacagctgaacgccatccaaggctgatcacaacccggaatgtcaaaaaa
gacaaagggaagtactttgggccatatccgaatgtccaggcggcgaatgaaacaaaaaag
ctgcttgaccggatctatccgctcaggaagtgctcgaccctccctgacagggtctgcctg
tactatcatatgggccagtgcctggcgccctgcgtcaagccggtcagcgaaaagcagtat
aaagatattgtcgatgagattgcacgatttttgaacggcggctacaaagacatcaagaaa
gagcttacagtcaaaatgacggcagcagcagaggaactggattttgaaagggcgaaggaa
ctgagggaccagatcgcccatattgaagcgacgatggaaaaacagaaaatgacatcgacc
gattttactgaccgcgatgtattcggctttgccgtcgataagggctggatgtgcgtccag
gtcttttttatcagacaggggaagctgattgaaagagatgtttcgctgttcccggtttac
ggggagcctgaggaagaaatgcttaccttcatgggccagttctatacaaaggcaaaccat
tttaaaccgcgtgaaattctggtgccggatacggtcaatgaagaaatggcagaaaagctc
ctggaagtaaaggtgctcaaaccgcagcgcggccagaagaaagatctggtcaagctggca
gggaaaaatgccaggattgccctccaggagaagttctcccttatagaacgggatgaggaa
cggacgatcaaagcggttgaaaatcttggcaggcagctgggcatttatacaccgcaccgc
attgaagcttttgataactcgaatatccagggcactgacccggtttctgccatgattgta
ttcatagacggcaaaccggaaaagcgcgaatacaggaaatataagatcaagacagtcaag
ggaccggatgattatgaatccatgcgcgaggctgtccggaggcggtacaccagggtgctt
aaagaaggtctgcccattccggatcttattattgtcgacggcgggaaaggccatattgaa
tcggtcagggatgtacttgaaaatgagctcgggcttgatatcccgatatccggccttgcc
aaggatgagaagcacaggacttcccagctcttgtatgggaatccgctggaaatcataccg
cttgagcggaacagccaggagttttatctgcttcagcgcatccaggatgaagtccaccgc
ttcgccatcaccttccaccggcagctccgcggaaaaagcgccttccagtcattgttggat
gacattcccggaattggcgagaagagaaagaagctgcttttgaaaaccttcggatccgta
aagaaaatgaaagaagccggtttggatgaatttacagctatcggaattccggctaatgtc
gcacaggaattaaaaaataaattatctgaatag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

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