KEGG   Bifidobacterium indicum: BINDI_1371
Entry
BINDI_1371        CDS       T03564                                 
Name
(GenBank) DNA gyrase, B subunit
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
bii  Bifidobacterium indicum
Brite
KEGG Orthology (KO) [BR:bii00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bii03032]
    BINDI_1371
   03400 DNA repair and recombination proteins [BR:bii03400]
    BINDI_1371
Enzymes [BR:bii01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     BINDI_1371
DNA replication proteins [BR:bii03032]
 Prokaryotic type
  DNA Topoisomerases
   BINDI_1371
DNA repair and recombination proteins [BR:bii03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      BINDI_1371
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim HATPase_c_3
Other DBs
NCBI-ProteinID: AIC91274
UniProt: A0A087VSF7
Position
5337..7427
AA seq 696 aa
MADLNADPSEDSPEQEGLKPQEQLDSAQLDDSLSPGHYDASDLKVLEGLEAVRIRPGMYI
GSTGPRGLHHLVYEIVDNSVDEALAGYADHIEVTILPDNGIRVVDNGRGIPVDEVPGEGK
SGVEVVMTKLHAGGKFGGGGYAVSGGLHGVGISVVNALSTRIDVQVRRQGYHWHQSFRDQ
TPNAPLSKDEPLGPDEHTGTSVTFWADPAIFETTEYDFETLRSRFQQMAFLNKGLRITLT
DLRPNEETGDEVAGEEEDPDEKGQTVSYQYANGIKDYVDYMVKVRKASPVEEDIIDFEAE
DLDMGISAEIAMQWTTSYSESVHTFANTISTTEGGTHEEGFRAALTTMVNRYAREKNILK
EKDDNLSGDDVREGLTAVISVKLTNPQFEGQTKTKLGNSEAKAFVQRVMTERMTDWFDSH
PSEAKSIIQKAIEASHARLAAKKARENTRRKSIFETAGMPDKLKDCQSSNPEECELFIVE
GDSAGGSAIQGRNPMTQAILPLRGKILNTERASLDRMMKSDTIESLITAVGGGYGEEFDI
NKVRYHKVIIMADADVDGAHIATLNLTLFFRYMRPMIEAGYVYVAMPPLYRLKWTKGPHD
FVYTDAERDRVLAEGKSSGRQLPKGEGIQRYKGLGEMSYQELWETTMDPENRILKKIHIE
DAEQADETFTMLMGDEVEPRRLFIQRNAHDARFIDA
NT seq 2091 nt   +upstreamnt  +downstreamnt
gtggcagatcttaatgctgatccgtctgaagattcacctgagcaggaggggttgaagccc
caggaacagctggacagtgcccagctggatgactccctctcccctggtcattatgacgcc
agcgatctgaaggttctggaggggctggaggccgtgcgcatccgtcccggtatgtatatc
ggttccacaggtccccgcggcctgcaccacctggtctatgagatcgtcgacaattcggtc
gacgaggcgctcgccgggtatgcggatcatatcgaagtgaccatccttcccgataacggc
atccgcgttgtcgacaacggtcgtggcatccccgttgacgaggtccccggcgaggggaag
agcggcgttgaggtggtcatgaccaagctccacgcgggcggcaagttcggtggcggcggc
tacgcggtctccggaggtctgcacggcgtgggcatctccgtggtcaacgccctctccacc
cgcatcgatgttcaggtgcggcgtcagggctatcactggcatcagagcttccgcgaccag
acccccaacgctcccctttccaaggatgaacccctggggccggacgagcataccggcacc
tcggtcaccttctgggcggatccggcgatattcgaaacaacggagtatgacttcgagacc
ctgcgcagccgcttccagcagatggccttcctcaacaaggggcttcgcatcacccttacc
gacctgcgtcccaatgaggagaccggtgacgaggtcgccggcgaagaggaggacccggac
gaaaagggtcagaccgtcagctatcagtatgccaacggcatcaaggactatgtagactac
atggtcaaggtccgcaaggcctctccggtcgaggaggacatcatcgatttcgaggccgag
gacctcgatatgggcatatcggccgaaatcgccatgcagtggacaacctcctactccgag
tcggtccacaccttcgccaacacgatttcgaccaccgagggcggaacccacgaagagggc
ttccgtgctgccctgaccaccatggtcaacaggtacgcccgggagaagaacatcctcaag
gagaaggacgacaacctttccggcgacgatgtgcgtgagggactgacggccgtcatctcg
gtgaagctgaccaacccccagttcgaaggtcagaccaagaccaagctgggtaactcggag
gccaaggcctttgtgcagcgggtgatgaccgagcggatgaccgactggttcgattcccac
ccatccgaagccaagagcatcatccagaaggccattgaggcctcgcacgcccgtcttgcc
gccaagaaggcccgtgagaacacccggcgcaagtccatcttcgagacggcgggcatgccc
gacaagctcaaggactgccagtccagcaaccccgaggagtgcgagctcttcatcgtggag
ggtgattctgcaggcggttccgccattcagggccgcaatcccatgacccaggccattctg
ccgctgagaggcaagatcctcaacacggaacgggccagcctggaccgcatgatgaagtcc
gacacaatcgaatccctgattacggccgtcggcggcggttacggcgaggaattcgacatc
aacaaggtgcgctaccacaaggtcatcatcatggccgatgccgatgttgacggtgcccac
atcgccaccctgaacctgaccctcttcttccgctatatgaggcccatgatcgaggccggc
tacgtgtacgtggccatgcctcctctgtaccggctcaagtggaccaagggtccccatgac
ttcgtctacacggacgccgagcgcgacagggtgctggccgagggcaagtcctccggccgt
cagctccccaagggcgaaggaatccagcgctacaagggtctgggagagatgagctaccag
gagctctgggagaccaccatggacccggagaaccgcatcctcaagaagatccacatcgag
gatgccgaacaggccgatgagaccttcaccatgctcatgggagacgaggtcgaaccccgc
cgtctcttcatccagcgcaacgcccatgacgcacggttcatcgacgcctga

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