KEGG   Bos indicus (zebu cattle): 109560336
Entry
109560336         CDS       T04792                                 
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit
  KO
K01890  phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
Organism
biu  Bos indicus (zebu cattle)
Pathway
biu00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:biu00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    109560336
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:biu01007]
    109560336
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:biu03016]
    109560336
Enzymes [BR:biu01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.20  phenylalanine---tRNA ligase
     109560336
Amino acid related enzymes [BR:biu01007]
 Aminoacyl-tRNA synthetase
  Class II (U)
   109560336
Transfer RNA biogenesis [BR:biu03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    109560336
 Prokaryotic type
    109560336
SSDB
Motif
Pfam: tRNA_synthFbeta PhetRS_B1 B5 B3_4 EAD7
Other DBs
NCBI-GeneID: 109560336
NCBI-ProteinID: XP_019818012
UniProt: A0A6P5BYB0
Position
6:35113017..35114943
AA seq 589 aa
MPTVSVKXDLLFRALGRTYTDEEFDELCFEFGLELDEITSEKEIISKEQGNEKAHGASDV
VLYKIDVPANRYDLLCLEGLVRGLQVFKERIKTPMYKRVMPKGEIQKLIITEETAKIRPY
AVAAVLRNIKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTYTAKKPSD
IKFKPLNKSKEYTACELMNIYKTDNQLKHYLHIIENKPLYPVIYDSKGVVLSMPPIINGN
HSKITVNTKNVFIECTGTDFTKAKIVLDVIVTTFSEYCENQFTVEAAEVVFPNGKLHTFP
ELAYRKEMVRADLINKKVGIRETPENLAKLLTRMCLKSEVIGDGNQIEVEIPPTRADIIH
ACDIIEDAAIAYGYNNIQMTLPKTYTIANQFPLNKLTELLRQDMAAAGFTEALTFALCSQ
EDIADKLGMDISATKAVHISNPKTAEFQVARTTLLPGLLKTLAANRKXPLPLKLFEISDI
VIKDSSRDVGARNYRHLCAVYYNKNPGFEIIHGLLDRIMZLLDVPPGEKKGGYAIKASEG
PVFFPGRCAEIFARGQSIGKLGVLHPDVITKFELTMPCSCVEINIEPFL
NT seq 1770 nt   +upstreamnt  +downstreamnt
atgccgactgtcagcgtgaagygagatctgctcttccgagccctgggccggacctacact
gatgaagaatttgatgaactgtgctttgaatttggactggaacttgatgaaattacatct
gaaaaggaaattataagtaaggaacaaggtaatgaaaaggcccatggggcctctgatgtt
gttctctacaaaattgacgtccctgccaatagatatgacctgctgtgtctggaaggattg
gttcgaggacttcaagtcttcaaagaaaggataaagactccaatgtataaacgggtaatg
cctaaaggagaaatccagaagttgatcatcacagaagagacagctaaaatacgcccgtac
gctgttgcagcggttctccgaaacataaagtttacaaaagatagatatgacagcttcatt
gaacttcaggagaaattacatcagaacatttgcaggaaaagagccttggttgctattggt
acccatgatttggacactttgtcaggtccatttacttacactgcaaagaaaccttctgat
atcaaattcaagcctctaaataagagtaaagagtatacagcctgtgaactgatgaacata
tacaagactgacaaccagcttaaacattatttacatataattgaaaataaacctctgtac
ccagttatctatgatagcaaaggtgtcgtcctttccatgcctccaatcatcaacggaaac
cattccaaaataacagtaaatacgaaaaatgtatttattgagtgcacaggaactgacttt
actaaggcaaaaatagttcttgatgtcattgttaccacgttcagtgaatattgtgagaat
cagtttacggttgaagcagctgaggtagtttttcctaatggaaaattacatacctttcca
gaactggcttatcgaaaggagatggtgagagctgacctaattaacaaaaaagttgggatc
agagaaactccagaaaatcttgccaagcttctgaccaggatgtgtttaaagtcagaagtc
ataggcgatgggaatcagatcgaggttgaaatccccccgaccagagctgacattatccac
gcctgtgatatcatagaagacgcagctattgcttacggatataacaacattcagatgact
ctcccgaaaacgtacaccatagctaatcaatttcccctaaataaactcacagaactcctg
agacaggacatggcagctgccggattcaccgaagcacttacctttgctctgtgctcccaa
gaagatattgctgacaaactgggtatggatatctctgcaaccaaggccgtccacataagt
aatcctaaaacggctgaattccaggtggcacgcackacccttcttcctggcctcctcaag
accctagctgccaatcggaagaygccacttcctctgaagctgtttgaaatttctgacatt
gtaataaaagattctagcagagatgtgggtgcaagaaactacaggcatctctgtgctgtt
tattacaacaagaatcctgggtttgagataatccatgggcttctggatagaatcatgsag
ctgcttgacgtgcctcctggtgaaaagaagggaggatatgcaatcaaagcatcagaaggc
cctgtgttcttycctgggcgatgtgcagagatctttgcccggggccagagcatcgggaag
ctgggggtccttcatcccgacgttatcaccaagttcgagctgactatgccctgctcctgc
gtggaaatcaacattgagccrtttttgtga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (26)   

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