KEGG   Bos indicus (zebu cattle): 109561411
Entry
109561411         CDS       T04792                                 
Symbol
LSM4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
biu  Bos indicus (zebu cattle)
Pathway
biu03018  RNA degradation
biu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:biu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109561411 (LSM4)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    109561411 (LSM4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:biu03019]
    109561411 (LSM4)
   03041 Spliceosome [BR:biu03041]
    109561411 (LSM4)
Messenger RNA biogenesis [BR:biu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     109561411 (LSM4)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     109561411 (LSM4)
Spliceosome [BR:biu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    109561411 (LSM4)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 109561411
NCBI-ProteinID: XP_019819398
UniProt: A0A6P5C1R2
Position
7:4807965..4820541
AA seq 139 aa
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVAKGRGRGGLQQQKQQKGRGMGGAGRGVFGGRGRGGI
PGTGRGQPEKKPGRQAGKQ
NT seq 420 nt   +upstreamnt  +downstreamnt
atgcttcccttgtcgctgctgaaaacggctcagaatcacccaatgttggtggagctcaaa
aacggggagacatacaacgggcacctggtgagctgcgacaactggatgaacatcaacctg
cgcgaggtgatctgcacgtccagggacggggacaaattctggcggatgcctgagtgctac
attcgcggcagcaccattaagtacctgcgcatccccgacgagatcatcgacatggtcaag
gaggaggtggtggccaagggccgtggccgcggtggcctgcagcagcagaagcagcagaag
ggccgagggatggggggcgccgggcgaggtgtgttcggtggccggggccgaggtgggatc
cccgggactggcagaggtcaaccagaaaagaagccaggccgacaggcgggcaagcagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (16)   

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