KEGG   Bradyrhizobium diazoefficiens USDA 110: blr1537
Entry
blr1537           CDS       T00109                                 
Symbol
ruvB
Name
(GenBank) holliday junction DNA helicase
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
bja  Bradyrhizobium diazoefficiens USDA 110
Pathway
bja03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bja00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    blr1537 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bja03400]
    blr1537 (ruvB)
Enzymes [BR:bja01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     blr1537 (ruvB)
DNA repair and recombination proteins [BR:bja03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     blr1537 (ruvB)
    RecFOR pathway proteins
     blr1537 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 Mg_chelatase AAA_22 AAA_3 AAA_16 nSTAND3 AAA_2 Rad17 AAA_14 AAA_18 AAA_17 NTPase_1 AAA_33 AAA_28 TsaE RNA_helicase DUF815 NB-ARC MCM NACHT AAA_24 AAA_7 IstB_IS21 ABC_tran Sigma54_activ_2 Parvo_NS1 AAA_PrkA
Other DBs
NCBI-ProteinID: BAC46802
UniProt: Q89U80
Position
1677538..1678593
AA seq 351 aa
MSDPKANRMVSPERRSDDVGDTALRPQSLSDFVGQQQARKNLSIFIEAARKRGEALDHVL
FVGPPGLGKTTLAQIVAKELGVGFRATSGPVIAKAGDLAALLTNLEERDVLFIDEIHRLS
PAVEEVLYPAMEDFQLDLIIGEGPAARSVKIELSKFTLVGATTRAGLLTNPLRDRFGIPV
RLNFYTIEELESIVSRGARVLNVGMSADGANEIARRARGTPRIAGRLLRRVRDFASAADA
DTIDRKIADHALSALEVDAAGLDAMDRRYLTTIAMNYGGGPVGVETMAAALSEPRDAIED
IIEPYLIQCGYLQRTPRGRLLTSHAFRHLGLAEPNRDAAQFGLFGTDESDD
NT seq 1056 nt   +upstreamnt  +downstreamnt
gtgagcgatcccaaggccaaccgcatggtctcgccagagcgccgcagcgacgatgtcggc
gacaccgcgctgcgcccgcaatcgctgtccgacttcgtcggccagcagcaggcgcgcaag
aacctctcgatcttcatcgaggcggcgcgcaagcgcggcgaggcgctggatcatgtgctg
ttcgtcgggccccccggcctcggcaagaccacgctggcgcagatcgtggccaaggagctc
ggcgtcggcttccgcgccacgtcgggtcccgtgattgccaaggccggcgacctcgccgcc
ctgctgaccaacctcgaagagcgcgacgtgctcttcatcgacgagatccatcgcctgagc
ccggcggtggaagaggtgctctatcccgcgatggaggattttcagctcgacctcatcatc
ggcgagggcccggcggcgcgctcggtgaagatcgagctgtcgaagttcaccctcgtcggc
gccaccacgcgtgcgggcctcctcaccaatcccttgcgcgaccgtttcggcattccggtc
cggctgaatttctacacgatcgaggaactcgaaagcatcgtcagccgtggcgcgcgcgtg
ctgaacgtcggcatgagcgcggacggcgccaacgagatcgcgcgccgcgcccgcggcacg
ccgcgcattgccgggcgcctgctccggcgcgtgcgcgattttgcttccgccgcggatgcc
gacacgattgatcgcaagatcgccgatcacgcgctgagcgcgctcgaggtcgacgccgcg
ggcctggacgccatggaccgccgctacctcaccaccatcgcaatgaactatggcggcggt
cccgtcggtgtcgagacgatggccgcagcgctctccgagccgcgcgatgcgatcgaggac
atcatcgagccctatctgatccagtgcggctatctccagcgcaccccgcgcggccgcctg
ctcacctcgcacgccttccgccatctcggtctcgccgaacccaatcgcgatgcggcgcag
ttcggcctgttcggcaccgacgaaagcgacgactga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (32)   
   Pfam (32)   
All databases (53)   

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