KEGG B.japonicum: blr3026

Bradyrhizobium japonicum: blr3026

Entry

blr3026 CDS B.japonicum

Gene name dnaE2

Definition error-prone DNA polymerase (EC:2.7.7.7)

Orthology K02337 DNA polymerase III subunit alpha [EC:2.7.7.7]

Pathway bja00230 Purine metabolism
bja00240 Pyrimidine metabolism
bja01100 Metabolic pathways
bja03030 DNA replication
bja03430 Mismatch repair
bja03440 Homologous recombination

Class Metabolism; Nucleotide Metabolism; Purine metabolism [PATH:bja00230]
Metabolism; Nucleotide Metabolism; Pyrimidine metabolism
[PATH:bja00240]
Genetic Information Processing; Replication and Repair; DNA
replication [PATH:bja03030]
Genetic Information Processing; Replication and Repair; Mismatch
repair [PATH:bja03430]
Genetic Information Processing; Replication and Repair; Homologous
recombination [PATH:bja03440]
Genetic Information Processing; Replication and Repair; DNA repair
and recombination proteins

SSDB

Motif Pfam: DNA_pol3_alpha tRNA_anti PHP
PROSITE: PDEASE_I

Other DBs NCBI-GI: 27378137
NCBI-GeneID: 1053315
RhizoBase: blr3026
UniProt: Q89QU8

Position 3339453..3342908

AA seq 1151 aa
MNTPAYAEIGITTNFSFLRGGSDPRAYVHQASILGISAIGIADHNTLAGVVRAYKELDND
KVLHKPKLLIGARIVFIDGTPDILVYPRDRAAYGRLCQLLTRGKRGDDVTRIEKGECRLT
FSDLLAFSEGQLLVLTLPHRFEPAQALDVLAKLKATRAEGVWLAASLVHRGDDRRRLARL
DDLATTAKVQLLATNEVLYHDPARRPLQDVLTCIREKTTIEAVGRKLEANAERFLKTPRE
MSRLFRDFPDAIAETMRFANKIDFSLDQLRYQYPDEPVPPGKTAQGHLEDLTWAGVDKYF
AGKIDDKLRATLKKELALIAELKYAHYFLTVHDIVHYARSQNILCQGRGSAANSAVCYVL
GITSVDPTKVDLLFERFISKERLEPPDIDVDFEHSRREEVMQYVYRRYGRHRAAIIATII
HYRPRSAIRDVGKALGLTEDVTAALADTVWGSWGSGLNDMQVKQAGLDPQNPMINLAVEL
ATELIEFPRHLSQHVGGYVLTQDRLDTYVPIGNAAMDDRTFIEWDKDDVDALNMMKVDVL
ALGMLTCIRKCFDLIDQHKGERWVLASVPQDDPKVYDMLCDGESLGVFQVESRAQMNMLP
RLKPRTFYDLVIEVAIVRPGPIQGDMVHPYLRRRNGQEKVNYPSPSPEHGPADELYKVLH
KTKGVPLFQEQAMRIAIEAAKFTSEEANGLRRSMATFRNVGTIGKYEDKLIGNMVARGYD
PNFARSCFDQIKGFGSYGFPESHAASFAQLVYISSWLKYHHPDAFCCGLLNSQPMGFYAP
AQIVGDARKNGVEVRDIDVSYSFAQNTLEQGSGKYCAVRLGFRQIDGFHWLDEDEEHLKR
SLLSFRGAPLGANPESIGPHMPGGMDSGLDAGASPRNDKKEDWANRIVAARNRRPFTSLE
DFARDTGLPKRALILLADADAFRSLGLDRREALWQVRRLPDDVPLPLFEAATAREQPDEH
AKPLPLMPRPEQVVADYQTIRLSLKGHPMEFLREMLSRERVVACKDVNHQNERRRVRCAG
VVLVRQRPGSASGVVFMTLEDETGIANVVVWPKIMEQYRKEVMGARLILVEGYIQSSPEK
VTHLIAQRMVDRSHDLIGLANDSLTRKHPVPSGDALIEPLNDDRRDHADAPAQKIRHPRN
VRILPPSRDFH

NT seq 3456 nt +upstreamnt +downstreamnt
atgaacacgcctgcttatgccgagatcggcatcaccaccaatttctccttcctgcggggc
ggttcggatccgcgggcctatgtgcaccaggcgagcatcctcggcatctccgcgatcggc
atcgccgatcacaacacgctggccggcgtggtgcgggcctacaaggagctcgacaatgac
aaggtgctgcacaagccgaagctgctgatcggcgcgcgcatcgtcttcatcgacggcacg
cccgacattcttgtctatccgcgcgaccgtgcggcctatggccggctctgccagctcctg
acccggggcaagcgtggcgacgacgtcacgcggatcgagaagggcgaatgccgtctcacc
ttctccgatctcctcgcgttttcggaaggccagctcctggtcttgaccctgccgcatcgc
ttcgagccggcgcaggcgctggatgtccttgcaaagctcaaagcgacccgcgccgagggc
gtgtggctggcggcgagcctggtccatcgcggcgatgaccgacgccgcctggcgcggctc
gacgatctcgcgacgacggcaaaggtgcagttgctcgcgaccaacgaggtgctctatcac
gatcctgcgcgccgtcccctccaggacgtgctcacctgcatccgggaaaagaccacgatc
gaggcggtcggacgaaagctcgaggccaatgccgagcgctttctcaaaactccgcgcgaa
atgtcgcggctgttccgtgacttccccgacgcgatcgcggagaccatgcgctttgcgaac
aagatcgacttctcgctcgaccagcttagatatcaatatccggacgagccggtgccgccg
ggcaagaccgcgcaagggcatctggaggacctgacctgggcgggcgtcgataaatatttc
gccggcaagatcgatgacaagctgcgtgctacgctcaagaaagagctcgcgctgatcgcc
gagctgaaatacgcgcactatttcctcaccgtgcacgacatcgtccattatgcgcgcagc
cagaacatcctgtgccaggggcggggatcggcggcgaattcagcggtgtgctacgtgctc
ggcatcacctcggtcgacccgaccaaggtcgatctcttgttcgagcgcttcatctccaag
gagcggctggagccgcccgacatcgacgtcgatttcgagcattcgcggcgcgaggaggtg
atgcaatatgtctatcgccgctatggccgtcaccgcgccgcgatcatcgccacgatcatc
cattatcgtccgcgtagcgccatccgcgacgtcggcaaggcgctgggcctgaccgaggac
gtcaccgccgcgctcgccgacaccgtctggggaagctggggcagtggcctcaacgacatg
caggtgaagcaggccgggcttgatccgcaaaaccccatgatcaacctcgcggtcgagctt
gcgaccgagctgatcgaattcccgcgccatctctcccagcatgtcggcggctatgtgctc
acccaggaccggctcgacacctatgtgccgatcggcaacgccgcgatggacgaccgcacc
ttcatcgaatgggacaaggacgacgtcgacgcgctcaacatgatgaaggtcgacgtgctt
gcgctgggcatgctgacctgcatccgcaaatgttttgacttgatcgaccagcacaagggc
gagcgctgggttctggcgagcgttccgcaggacgatcccaaggtctacgacatgctgtgt
gacggggagtcgctcggcgtgttccaggtcgagagccgcgcccagatgaacatgctgccg
cgcctgaagccgcggaccttctacgacctcgtcatcgaggtcgcgatcgtgcggccgggg
ccgatccagggcgacatggtgcatccgtatttgcgacgacggaacggccaggagaaggtg
aactatccctcgccatcgcccgagcatggtcccgcggacgagctctacaaggtgctgcac
aagacgaagggcgtgccgctgttccaggagcaggcaatgcgcatcgcgatcgaggcggcc
aaattcacctccgaggaggccaacggcctacgccgctcgatggcgactttccgcaatgtc
ggcaccatcggcaaatacgaagacaagctgatcggcaacatggtcgcgcgcggctacgat
cccaacttcgccagaagctgcttcgaccagatcaagggttttggttcctacggttttccg
gagagccacgccgcgagttttgctcagctcgtctacatttcgtcatggctgaaatatcat
catcccgatgcgttctgctgcggcctcttgaactcgcagccgatgggcttttacgcgccg
gcgcagatcgtcggcgatgcccgcaagaacggcgtcgaggtgcgcgacatcgacgtgtcc
tacagctttgcgcagaacacgctggagcaggggagcggcaaatactgcgcggtgcgcctc
ggcttccgccagatcgacggttttcattggctggacgaggatgaggaacatctgaaacgt
tccctgctgtcattccggggcgcgccacttggcgcgaacccggaatccatcgggccgcat
atgcctggcggaatggattccgggctcgacgctggcgcgtcgccccggaatgacaagaag
gaagactgggccaaccgcatcgtcgccgcccgcaaccgccgtcccttcacctcgctcgaa
gatttcgcccgcgacaccggcctgcccaagcgcgcgctgatcctgctcgccgatgccgac
gccttccgttcgctcgggctcgatcgccgcgaggcgctgtggcaggtgcggcggctgcca
gatgacgtgccgttgccgctgttcgaggccgccaccgcccgtgagcagcccgacgagcat
gcaaagccattgcccttgatgccgcgccccgagcaggtggtcgcggactaccagaccatc
cggctatcgctgaagggccacccgatggaattcctgcgcgagatgttatcgcgcgagcgc
gtcgtcgcctgcaaggacgtcaatcatcagaacgagcggcggcgtgtccgctgcgccggc
gtggtgctggtccggcagcggccgggcagcgccagcggcgtcgtgttcatgacgctggag
gacgaaaccggcatcgccaatgtcgtggtgtggcccaagatcatggagcagtaccgcaag
gaggtgatgggcgcgcgcctcatcctggtcgaaggctatatccagagcagccccgagaag
gtgacgcatctcatcgcccagcgcatggtcgaccgctcgcacgatctgatcggccttgcc
aatgactcgctgacccgcaagcatccggtgccatcaggcgacgcgctgatcgagccgctc
aacgacgaccgccgcgaccacgcggatgctccggcacagaaaatccgccaccctcgcaac
gtccgcatcctgccgccgtcgcgggattttcattga

All links

Pathway (6)   
   KEGG PATHWAY (6)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   RHIZOBASE-BJA (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (3)   
   PROSITE (1)   
All databases (21)

DBGET integrated database retrieval system