KEGG T00109: blr8031

Bradyrhizobium japonicum USDA110: blr8031

Entry

blr8031 CDS T00109

Definition

DNA ligase

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

bja Bradyrhizobium japonicum USDA110

Pathway

bja03410	Base excision repair
bja03420	Nucleotide excision repair
bja03430	Mismatch repair
bja03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:bja03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:bja03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:bja03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:bja03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_C mRNA_cap_enzyme DNA_ligase_OB_2

Other DBs

NCBI-GI:

NCBI-GeneID:

RhizoBase:

UniProt:

Position

8811971..8812921

AA seq 316 aa
MGRTSSLPKRLQPMLATLTDDPFDDPAWVFEDKYDGFRMIAEIRDGRAALYSRNGKLISR
SYTEVAAALEMVKGDAVIDGELVAIGKDGVSHFQLLQNALRHEAKLLYFAFDLMFANGED
LRKRPLLERKERLKTILPRHGLIGFSRHRKGKGRKFFAEAERGGLEGIMAKRIDGAYASG
SRTPDWLKIKTAKRQEVVIVGFTAPRRTRPFFGALVLAVREKESWRYIGHVGTGFSHQTL
AELHSRLTRLQVAKSPFPAKVKDETVTTWVRPFLVAEVKFAEWTTKGELRQPVYLGLRSD
KQAKDVVREQERLRSM

NT seq 951 nt +upstreamnt +downstreamnt
atgggccgcacgtcgagtttgccgaaacgcctgcagccgatgctcgcgaccttgacagat
gatccgttcgacgatcccgcctgggtcttcgaagacaaatacgacggcttccgtatgatt
gccgaaatcagggacggcagggccgctctctacagccgcaacggcaagcttatcagccgc
agctataccgaggtggccgcagcgctcgagatggtgaagggcgacgcggtgatcgatggc
gagttggtcgcgatcggaaaagacggagtatctcatttccagttgcttcagaatgccctc
cgccatgaagcgaagctgctgtatttcgccttcgatctcatgttcgcgaatggagaagat
ctgcggaagcggcctctcctcgaacgcaaggagcggctcaaaaccattctgccgcgccac
gggctgatcggttttagccgccaccgcaaggggaagggcaggaagttcttcgctgaggcc
gagcgcggtgggctcgaaggcatcatggcgaagcgcatcgacggtgcatacgcgtccgga
agccggactccggactggctcaagatcaagaccgcgaagcgccaggaggtcgtcatcgtc
ggcttcacggcgccaaggcgcaccaggcctttcttcggtgccttagttcttgctgtcagg
gagaaggagtcctggcggtacatcgggcatgtgggaacgggcttcagtcaccaaacgttg
gcggagcttcactccaggctaacccggctccaagtggcgaagtcgccttttcctgcgaaa
gtgaaggatgagacagtcacgacctgggtgagacctttcttggtagccgaggtaaagttc
gcagagtggaccaccaagggtgaactgcgccagcccgtctacctaggcctcagatccgac
aaacaggcgaaagacgtcgtgcgcgaacaagagcggcttcgctcgatgtga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
   RHIZOBASE-BJA (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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