KEGG T02027: MY9

Bacillus sp. JS: MY9_1468

Entry

MY9_1468 CDS T02027

Definition

ATP-dependent DNA ligase

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

bjs Bacillus sp. JS

Pathway

bjs03410	Base excision repair
bjs03420	Nucleotide excision repair
bjs03430	Mismatch repair
bjs03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:bjs03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:bjs03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:bjs03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:bjs03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M tRNA-synt_2

Other DBs

NCBI-GI:

386758045

NCBI-GeneID:

12769148

UniProt:

I0F3E9

Position

complement(1454042..1455880)

AA seq 612 aa
MALTMQPVLTSSPPIGEEWRYEVKYDGYRCILRIHSSGVTLTSRNGVELNSTFPEITQFA
KSVFQPMEKELPLTLDGEIVCLVNPCRADFEHLQVRGRLKRPDKIQESANARPCCFLAFD
LLERNGEDVTLLSYLDRKKSLYDLMSTAKLPVSPDPYAKETIQYIPCYDHFDQLWEMVMK
YDGEGIVAKKTNSKWLGKKRSSDWLKYKNFKQAHVCITGFNPNNGFLTVSVLKNRIMTPI
ASVSHGMRDEEKSAIREIMEQHGHQAPSGEFTLEPSICATVQYLTILQGTLREVSFVGFE
FQMDWTECTYAQVIRHSKPVHPKLQFTSLDKIIFEKNKKTKEDFIQYMIEVSDYLFPFLK
NRAVTVIRYPHGARSESFFQKNKPDYAPDFVQSFYDGSHEHIICEDMSTLLWLCNQLALE
FHVPFQTIRSRRPAEIVIDLDPPSRDDFIMAVQAANELKRLFDSFGITSYPKLSGNKGIQ
LYIPLSPEAFTYEETRQFTQLIAEYCTNAFPELFTTERLIKNRHGKLYLDYLQHAEGKTI
ICPYSTRGNELGTVAAPLYWHEVQSSLTPALFTIDTVIDRIKKKGCPFFDFYRNPQDEPL
SAILHQLKKRAD

NT seq 1839 nt +upstreamnt +downstreamnt
atggcgttaaccatgcagccggtccttacttcgtcaccgccaatcggagaagaatggcgt
tacgaagttaaatatgacgggtaccgatgtattcttcgcatccattcttcaggtgtgacc
ttaaccagcagaaatggtgtggagctcaacagcaccttccctgaaatcacacaattcgcc
aaaagtgtctttcagcctatggaaaaagaacttccgctgacacttgatggagaaatcgta
tgtttggtgaatccttgtcgtgcagattttgaacatcttcaagtacggggacgtttaaaa
aggccagacaagattcaggaatcggcaaacgcgaggccgtgctgctttctcgcttttgac
ttattagagcgaaacggagaagatgtaacgcttctttcgtatttggaccgtaaaaaatcg
ctgtatgacctcatgtccacagcaaagcttcctgtgtctccagacccttacgcaaaggaa
accatccaatatatcccctgttacgatcattttgatcaactctgggaaatggtaatgaaa
tatgacggagaaggaattgtagcgaaaaaaacaaacagcaaatggctcggaaagaagcgg
tcgtccgattggctcaaatataaaaactttaaacaagcacatgtttgcataacaggcttc
aaccctaacaatgggtttctgacggtgtccgtattaaaaaacaggatcatgacaccgata
gcctctgtctcgcacggaatgcgtgatgaagaaaaaagcgcgatacgagagattatggaa
cagcacggacatcaagcaccttctggcgaatttacgcttgaaccttctatttgtgcaact
gttcaatacttaacgattcttcaaggcacactaagagaggtatcgtttgtcggtttcgaa
ttccaaatggactggaccgaatgcacgtatgcgcaagtcatacgccactccaaaccggtt
cacccaaagcttcagttcacaagcctggataaaatcatatttgaaaagaataaaaaaaca
aaagaagattttattcagtatatgattgaagtcagtgactacctgtttccatttctgaaa
aaccgtgctgtcaccgtcattcgctatccgcatggagctaggagcgaatcatttttccaa
aaaaacaagccggactacgcgccggattttgttcaatctttctatgacggaagccatgag
catattatctgcgaggatatgtctacgttgttatggctttgcaaccagcttgctttggag
tttcacgttccttttcaaaccattagaagcaggcgtccggctgagattgtcattgattta
gacccgccttcgcgagatgactttattatggccgttcaggctgcaaatgaactgaagcgg
ctgtttgactcctttggcattacttcgtacccgaagctgtccggcaacaaaggcatccag
ctttatattcccttgtctcctgaggctttcacgtatgaagaaacacgccaatttacacag
ctgattgccgagtactgcaccaatgcatttcccgagctatttaccactgaacgcttgatt
aaaaacaggcacggcaaattgtatcttgattatttgcagcatgcagaaggaaaaacgatt
atctgtccctattcgacgagaggaaatgagctcgggactgtcgcggcaccgctttactgg
catgaagtccaatcatctttaacacccgctctgtttacaattgataccgtcattgatcgg
attaagaaaaagggctgcccattttttgatttttaccgcaacccgcaggacgaacctctt
agcgctatattacatcagttgaaaaaaagagctgactaa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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