KEGG T01848: BJ6T

Bradyrhizobium japonicum USDA 6: BJ6T_26450

Entry

BJ6T_26450 CDS T01848

Definition

hypothetical protein

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

bju Bradyrhizobium japonicum USDA 6

Pathway

bju03410	Base excision repair
bju03420	Nucleotide excision repair
bju03430	Mismatch repair
bju03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:bju03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:bju03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:bju03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:bju03450]

SSDB

Motif

Pfam:

LigD_N DNA_ligase_A_M DNA_ligase_A_C DNA_primase_S

Other DBs

NCBI-GI:

384216345

NCBI-GeneID:

12144608

UniProt:

G7DBZ5

Position

2716406..2719072

AA seq 888 aa
MLRKLSTYRQKRDFEKTPEPSGKTAVAPSAQRRFVIQKHDATRLHYDLRLEFDGVFKSWA
VTKGPSLDPHDKRLAVEVEDHPLDYGDFEGTIPEGQYGGGTVMLWDRGTWESEDPERGFQ
KGDLKFTLHGDKLHGSWVLVRMRHDRNGGKRTNWLLIKHRDEYASESDDILSEDKSVASG
RAMAEIADGKGRAPKPFMLAKGAKAKADAVWQSNRAEEPKGRTVRPAPGAALKRGTGAKT
KATTATNAKKVSEMPDFVAPQLCTPVERPPAADGWCHEIKFDGYRVQLRVEDGEATLKTR
KGLDWTDKFAAIAKEAGELPDVMIDGEIVALDHNGAPNFSSLQAALSDGKTEDLIFFAFD
LLFAEGLDCRRLPLGERKDRLRQLLDAGKRKSSQIRYVEHFESSGDAVLQSACKLELEGV
VSKKLDAPYRSGRTESWTKAKCRAGHEVVIGGWKTTNGKFRSLMAGVHRGDHLAFVGMVG
TGFGADTVKRIMPSLKAMEAGQSPFGGKNAPKKTRDVHWLKPELVAEIEFAGFTADGNIR
QAAFKGLRQDKPAEEVEAETPADTELAKPSARKRAVPSAGKRKDAGTAEVMGVVISKPDK
ELWPDGGDGEGVTKLDLARYFEAVGAWMIEHIKGRPCSILRAPDGIGGEKFFQRHAMQGT
SNLLELAKVSGDRKPYLQIDRVEGLAAVAQIGGVELHPWNCAPDAYDTPGRLVFDLDPAP
DVKFADVVDAAKEMRQRLSDVGMESFCKTTGGKGLHVVVPLLHGARDKVSWKEAKAFAQG
VCQWMADDDPERYLLNMSKKLRNGKIFLDYLRNDRLSTAVAPLSPRARDGATVSMPVTWA
QVKGDLDPKRYTVRTVPGLLARSKAWDGYDDAAISIKAAAKKLAGKKK

NT seq 2667 nt +upstreamnt +downstreamnt
gtgctgcgaaaactctccacctaccgacagaaacgcgatttcgagaagacaccggagccg
tcgggcaagaccgcggtggcgccatcggcgcagcggcgcttcgtgatccagaagcacgat
gcgacgcggctgcactatgatctgcggctcgagttcgacggcgtgttcaagtcgtgggcg
gtcaccaagggaccctcgctcgatccgcatgacaagcggctggcggtcgaggtcgaggac
catccgctcgactatggcgatttcgaaggcacgattccggaaggacagtatggcggcggc
acggtcatgctctgggaccgcggcacctgggagtcggaggatcccgagcgcggtttccag
aagggcgacctcaagttcacgctccacggcgacaagctgcatggaagctgggtgctggtg
cggatgaggcatgaccgcaacggcggcaagcgcaccaactggctcctgatcaagcatcgc
gacgaatatgccagcgagagcgacgacattctaagcgaggacaagtcggtggcctccggc
cgcgcgatggcagagatcgccgatggcaagggccgcgcgccaaaaccgttcatgctggcg
aagggtgccaaggccaaggccgatgcggtctggcagtccaatcgtgccgaggagccgaaa
gggcgcaccgtcaggccggcgcccggcgcggcgttgaagcgcgggacgggcgcaaagaca
aaggcgacgaccgcgacaaatgcgaaaaaggtctcggagatgccggacttcgtcgcgccg
cagctctgcaccccggtcgagcggccgccggcggccgacggctggtgccacgagatcaag
ttcgacggctatcgcgtccagctccgcgtcgaggacggcgaggcgacgctgaagacgcgc
aagggcctcgactggaccgacaagttcgcggccatcgcgaaggaggcgggggagcttccc
gacgtcatgattgacggcgagatcgtcgcgctggatcacaacggcgcgccgaatttctcc
tcgctccaggccgcgctgtcggacggcaagaccgaggacctgatcttctttgccttcgac
ctcctgttcgccgaggggctcgattgccggcgcctgccactcggcgagcgcaaggaccgc
ctcaggcaactcctggacgcgggcaagaggaagtcgagccaaatccgctatgtcgagcat
ttcgagagcagcggcgatgccgtgctgcaatcggcctgcaagctcgagctcgaaggcgtg
gtgtcgaagaagctcgatgcgccttaccggtcggggcgaacggaaagctggaccaaggcc
aaatgccgcgccggccatgaggtcgtgatcggcggctggaagaccaccaacggcaaattc
cgctcgctgatggccggcgtgcaccgcggcgatcatctcgccttcgtcggcatggtcggc
accggcttcggcgcggacacggtcaagcgcatcatgccgtccttgaaggccatggaggcc
gggcaaagccccttcggcggcaagaacgcgccgaaaaagacgcgcgacgtgcactggctg
aagccggagctcgtcgccgagatcgagttcgccggcttcaccgccgacggcaatatccgc
caggccgccttcaagggcctgcggcaggacaagccggccgaggaggtcgaggcggaaaca
cccgccgataccgaactcgccaagccctcggccaggaagcgtgccgtgccgagtgcaggc
aagcggaaggatgccggcacggccgaggtgatgggtgtcgtcatctcgaagccggacaag
gagctgtggccggatggcggcgacggcgagggtgtcacaaagctcgatcttgcgcgctac
ttcgaggccgtcggtgcctggatgatcgagcacatcaagggccggccctgttcgatcctg
cgcgcgcctgatggcatcggcggcgaaaaattcttccagcgccatgccatgcagggcacg
tcgaacctgctggagctcgcgaaagtctcgggcgatcgcaagccgtatctgcagatcgat
cgcgtcgaggggctcgccgcggtcgcgcagatcggcggcgtcgagctgcatccctggaat
tgtgccccggacgcctacgatacgccgggccggctggtgttcgatctcgatcccgcgccg
gacgtcaaatttgcagatgtcgtggacgccgccaaggagatgcggcagcgcctttccgac
gtcggcatggagagcttttgcaagaccaccggcggcaagggcctgcacgtggtggtgccg
ctgctccacggcgcgcgcgacaaggtgagctggaaggaggccaaggcgttcgcgcaaggc
gtttgccagtggatggccgacgacgatcccgagcgctatctgctcaacatgtcaaagaag
ctgcgcaacggaaagatcttcctggattatttgcgcaatgaccgcctgtcgacggcggtg
gccccgctgtcgccccgtgcgcgcgatggcgcgaccgtgtcgatgcccgtgacgtgggcg
caggtgaagggcgatctcgatccgaagcggtacacggtgcggacggtgccgggtctgctg
gcgcgctcgaaagcctgggatggctatgacgacgcggcgatatcgatcaaggcggcggcg
aagaagctcgcggggaaaaagaagtag

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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