KEGG T01848: BJ6T

Bradyrhizobium japonicum USDA 6: BJ6T_31410

Entry

BJ6T_31410 CDS T01848

Definition

hypothetical protein

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

bju Bradyrhizobium japonicum USDA 6

Pathway

bju03410	Base excision repair
bju03420	Nucleotide excision repair
bju03430	Mismatch repair
bju03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:bju03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:bju03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:bju03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:bju03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_C

Other DBs

NCBI-GI:

384216838

NCBI-GeneID:

12145104

UniProt:

G7DHI3

Position

complement(3219346..3220365)

AA seq 339 aa
MQLMEAESVAQLPRGAQWQYEPKWDGFRCLLIRERSRVSMQSKSGRDLVRYFPEIAAAAA
ALSPKTLTLDGELIIELDEGYSFDALLQRIHPAASRVKHLAKETPATFMVFDLLRSGARD
LSGLPLMKRRAALETLAGKAFQASGLFRLTPASRNYADAEAWLNSVNEDHDGVVAKRLDL
PYRGGTRDGMQKIKLLRSADCVVGGFRYAERKQGNRKVVGSLLLGLYDKGGLLHHVGFTS
GIRSSDRLALTDRLEKIVGLQSFTGNSPGGPSRWSTKRSAEWKAVRPTFVVEVSYDHVTG
DRFRHGTKVIRWRPDKKPSQCRMDQLRQRAATQTFRAAT

NT seq 1020 nt +upstreamnt +downstreamnt
atgcagctcatggaagccgagtccgtcgcccaactgccacggggggcccagtggcaatac
gagccgaaatgggatggattccgttgtcttttgatccgcgaacgcagccgagtcagcatg
caatccaaaagcggccgtgatctggttcgttacttcccggaaattgccgcagccgcggcc
gccttgtcgccgaagacgctcaccctggatggtgagttgatcatcgagcttgatgagggc
tattcgtttgatgcgttgcttcaacgcattcatccggccgccagccgggtcaagcacctt
gccaaagaaactcccgcaaccttcatggtttttgacctgttgcgatcgggcgcgagagat
ctttcgggtctgccgcttatgaagcgccgcgccgctcttgaaacacttgcgggaaaggcc
ttccaggcgagcgggcttttccggctgacaccggcaagccgaaactatgcggatgccgag
gcctggctcaacagcgtaaatgaagatcatgatggcgtggtcgccaagcgcctcgaccta
ccctatcgaggcggcacccgagacggcatgcagaagatcaagctgctgcgatcggctgat
tgcgttgttggcggatttcgttatgccgagaggaagcagggcaatcgaaaagtcgttggc
tcgttgctgctcggcctctacgacaagggtggacttctgcaccatgtcggatttacgtcc
ggcatccgatcgtccgatcgactggctctcaccgatcggctggagaaaatcgtcgggttg
cagagcttcaccggcaattcaccgggcggtccaagccgctggtcgacaaagcgatcggct
gaatggaaagccgtgcgtccaactttcgtggtcgaagtatcctatgaccatgtgacgggc
gaccgctttcggcacggcacgaaagtcatccgctggcgtcctgacaagaagccctcgcaa
tgtcgcatggatcagcttcggcagagggcggccacacaaaccttccgagcagcgacgtag

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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