KEGG   Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854: BBKW_1689
Entry
BBKW_1689         CDS       T04223                                 
Name
(GenBank) endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
bks  Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854
Pathway
bks03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:bks00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BBKW_1689
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bks03400]
    BBKW_1689
Enzymes [BR:bks01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     BBKW_1689
DNA repair and recombination proteins [BR:bks03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     BBKW_1689
 Prokaryotic type
     BBKW_1689
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S RecR_HhH HHH_5
Other DBs
NCBI-ProteinID: BAQ29824
Position
2001527..2002192
AA seq 221 aa
MPKESKQARLSRMHQEYAVLCEEIPHPKCALNFSNPFELLVATVLSAQTTDKRVNMVTPE
LFDEYPGPDALASANPERVESIIHSIGFHHTKAKNIIGLSYALCERFDGKVPQNMDSLTS
LPGVGRKTANVVLGNAFGVPGFPVDTHVIRVTGRLRWRSDWASGSPDPKAIEREITACFP
PEEWTDLSHRLILHGRAICHARKPDCLNCPLNDTCPSAFAA
NT seq 666 nt   +upstreamnt  +downstreamnt
gtgcccaaggaatcgaaacaagcgcgactgtcacgcatgcatcaggaatacgcagtattg
tgcgaggagattccacatccgaagtgcgcgctgaatttttcgaatccttttgaattgctg
gtggcgaccgtactgagcgcacaaaccaccgacaagcgggtgaatatggtcacaccggaa
ttattcgacgaatatccgggaccagacgcacttgcgagcgccaatcccgaacgtgtggaa
agcatcattcattccatcggatttcatcatacgaaagcaaagaacatcatcggactttct
tacgcattgtgcgaacggttcgatggcaaagtgccgcaaaatatggactctttgacaagt
ctgccaggcgtgggacgcaaaaccgcgaatgtagtacttgggaacgcttttggcgtgccg
ggttttcctgttgacactcatgtgattcgtgtgaccggtcgactgcgctggcgttcggat
tgggcgagtggatctcctgaccccaaggccattgaacgcgagatcaccgcatgcttccca
cccgaggagtggactgatctgtctcacaggctgatactgcacggtcgtgccatatgccat
gctcgcaagccggactgcctgaactgcccgcttaacgacacctgccccagcgcattcgca
gcgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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