KEGG   Bifidobacterium animalis subsp. lactis AD011: BLA_0664
Entry
BLA_0664          CDS       T00819                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
bla  Bifidobacterium animalis subsp. lactis AD011
Pathway
bla03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bla00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BLA_0664 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bla03021]
    BLA_0664 (rho)
   03019 Messenger RNA biogenesis [BR:bla03019]
    BLA_0664 (rho)
Transcription machinery [BR:bla03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     BLA_0664 (rho)
Messenger RNA biogenesis [BR:bla03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     BLA_0664 (rho)
SSDB
Motif
Pfam: ATP-synt_ab Rho_RNA_bind Rho_N SAP PIP5K Spore_III_AA ARMET_C
Other DBs
NCBI-ProteinID: ACL28957
UniProt: B8DWV6
Position
complement(857566..859596)
AA seq 676 aa
MADSQDLSKMKLPELKEIAKELGLRGLSAKRKGDLVAAIEEARAKQSSAKSETAPAQAEQ
PAGHDDAVSVPVRKTGARRVVRKAGEPKAVEESAAEQPTQVKEEGHAALPAEEEMTQIRG
RRVRGKRRQMESADQAATNGETSAAEQLLSTLNLPEHAERGGEQPRRRRGAVDSLPTRRR
AGAAAVREPDAEAKPDLDDILSSLPLSANDDESDERHEEHAHRRGERGSRTNDRSNARAD
RENRQHRRNRNERDYEEREEGNERRSRDERGNNRNERNNRNDRNERREENTEDLVEVGGI
VDVLDSYAFIRTSGYLPGPNDIYVSMGQIKKYGLRKGDAVRGYTRAPHEGERRNQRQKFM
PLQSITLINGLSVEEAQDRPNFSKLTPLYPDERLRMETTPNRIIGRLIDIVSPIGKGQRG
LIVSPPKAGKTITLQNIANAIAVNNPEVHLMVVLVDERPEEVTDMERTVKGEIISSTFDR
PASDHTIVAELAIERAKRLVELGQDVVVLLDSMTRLARAYNIAAPASGRILSGGVDAQAL
YPPKKFFGAARNIENGGSLTIISSALVETGSKMDEVIFEEFKGTGNMELRLSRELADKRL
FPAVDINASGTRREELITNPQELPVLYSLRRLLGGLEPEQAYQTLVPRLKKTMTNADFFK
AIVQQGNSSLNGGSNN
NT seq 2031 nt   +upstreamnt  +downstreamnt
gtggccgatagccaagatttaagtaagatgaagctgcctgagctcaaggagatcgccaag
gaacttggcttgcgcggtctttctgcgaagcgcaagggcgacttggtggcagcgatcgaa
gaggcccgcgccaagcagtcgtcggcgaagagcgaaacggcaccggcacaggcggaacag
cccgcagggcacgatgatgcagtctccgttccggttcgcaagaccggtgcccgacgcgtg
gtgcgcaaggccggcgagccaaaggcagtcgaggagtctgctgccgaacagcctacccag
gtgaaggaggagggccatgccgccctgcccgccgaagaggagatgacccagattcgcggt
cgccgcgtgcgcgggaagcgccgtcagatggaatctgcggatcaggctgcgaccaatggt
gagacgtccgccgccgagcagctgctgagcacgctgaatctgcccgagcacgcagagcgc
ggcggtgagcagccacgtcgccgtcgcggtgccgtggactcactgcccacgcggcggcgt
gcaggagcggcggccgtgcgtgaaccggatgcggaagccaagccggatctagacgacatt
ctctcgtcattgccgctgagtgcgaatgacgacgagagtgacgaacgtcacgaggagcat
gcgcatcgccgtggcgagcgcggaagccgcaccaacgaccgttcaaatgcgcgtgccgac
agggagaaccgccagcaccgcaggaaccgcaacgaacgtgactacgaggagcgtgaggag
ggcaacgaacgccgttcccgcgacgaacgtggcaataatcgcaatgagcgcaacaatcgc
aacgaccgcaatgagcgtcgcgaggagaacaccgaggatctcgtggaggtcggcggcatc
gtcgacgtgctcgattcctacgcgttcattcgcacttccgggtacctgcccggaccgaac
gacatctatgtgtcgatggggcagatcaagaagtacggcctgcgcaaaggcgatgccgtg
cgcggttacacgcgtgcgccccatgagggcgagcgccgcaaccagcgtcagaagttcatg
ccgttgcagtcgatcacgctcatcaacggcctaagcgtggaagaggcacaggatcgcccg
aacttcagcaagctcacgccgttgtaccccgacgagcgcctgcgtatggagaccacgccg
aaccgcatcatcggccgcctgatcgacatcgtttcgccgatcggcaagggccagcgcggc
ctgatcgtctctccgccgaaagctggcaagacgatcacgctgcagaacatcgccaatgcg
atcgctgtgaacaatcccgaggtgcacctcatggtcgtgctcgtcgatgaacgcccggaa
gaggtcaccgacatggagcgcaccgtgaagggtgagatcatctcgtccaccttcgaccgc
ccggcctccgaccataccatcgtcgccgagctcgccatcgaacgcgccaagcgcctggtg
gagctggggcaggacgtggtggtgctgctcgattccatgacgcgcctcgcccgtgcctac
aacatcgcggcacctgcctcagggcgcatcctctccggtggtgtggacgcccaggcactc
tacccgccgaagaagttcttcggtgccgcccgcaacatcgaaaacggcggttcgctcacc
atcatctcgtcggccctggtggagaccggttcgaagatggacgaggtgatcttcgaggag
ttcaagggcaccggcaacatggagctgcgtctgagtcgcgaactggccgacaagcgcctg
ttcccggctgtggacatcaatgcttccggcacccgccgtgaggagctcatcacgaacccg
caggaacttccggtgttgtacagcctgcgtcgcctgcttggcggcctggagcccgagcag
gcctatcagacgctcgtgccgcgcctgaagaagacgatgacgaatgcagacttcttcaaa
gcgatcgtgcaacagggcaacagctcgctgaacggcggctcgaacaactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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