KEGG   Blastomonas sp. RAC04: BSY18_2056
Entry
BSY18_2056        CDS       T04450                                 
Symbol
ligA
Name
(GenBank) DNA ligase, NAD-dependent
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
blas  Blastomonas sp. RAC04
Pathway
blas03030  DNA replication
blas03410  Base excision repair
blas03420  Nucleotide excision repair
blas03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:blas00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BSY18_2056 (ligA)
   03410 Base excision repair
    BSY18_2056 (ligA)
   03420 Nucleotide excision repair
    BSY18_2056 (ligA)
   03430 Mismatch repair
    BSY18_2056 (ligA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:blas03032]
    BSY18_2056 (ligA)
   03400 DNA repair and recombination proteins [BR:blas03400]
    BSY18_2056 (ligA)
Enzymes [BR:blas01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     BSY18_2056 (ligA)
DNA replication proteins [BR:blas03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     BSY18_2056 (ligA)
DNA repair and recombination proteins [BR:blas03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     BSY18_2056 (ligA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BSY18_2056 (ligA)
   MMR (mismatch excision repair)
    DNA ligase
     BSY18_2056 (ligA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      BSY18_2056 (ligA)
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD HHH_5 PTCB-BRCT
Other DBs
NCBI-ProteinID: AOG00912
UniProt: A0A1B3N6E2
Position
complement(2174205..2176268)
AA seq 687 aa
MKEVSALSEAEAAIELQRLAKKIAHHNRLYHAEDSPEISDADYDALARRNNELEAAFPHL
IRADSPSRMVGAAVEASPLTKVRHEQRMMSLDNGFSDEDIAEFVVRVRRYLALPEDEMLA
LTAEDKIDGLSLSLRYEQGVLVRAATRGDGEVGEDVTANVRMIADIPERLAGKAPEIFEI
RGEVYMSKADFTALNAAQAERDEKLFANPRNAAAGSLRQKDARVTAARPLRFLAHGWGVA
SEVPGDTQHEVMQAIAAMGVPVSPLLHRVESLEDLLAHYRSIEVQRADLPYDIDGVVYKV
DRLDWQARLGFVAKAPRWALAHKFPAERAETTLQAIDIQVGRTGKLTPVGRLTPVTVGGV
VVSNVTLHNRDEIARLGVRPGDRVVVQRAGDVIPQVVENLTREEPRGPYAFPDHCPVCAS
EAVAEEGEVDVRCTGGLICPAQQRERLKHFVSRAALDIDGLGERTIAEFLDAGFIEKPGD
IFRLKQHRSAILAREGWQEKSVDNLLASIEARRGADPGRFLFALGIRHVGSVTAKDLVKA
FGSVEAVGTIGHRLASGDAEAVAEVTGIDGIGPAVAEALGDFFHEPHNAAVFDDLIAEVR
PAAFVSTARETEWSGKTIVFTGKLETMSRDEAKAQAERLGAKSAGSVSAKTDLVVAGPGA
GSKLKKAAELGVRVVDEAEWAEIMRNA
NT seq 2064 nt   +upstreamnt  +downstreamnt
atgaaagaagtatcggcgctctccgaagccgaagccgcgatcgagctgcagcggctcgcc
aagaagatcgcgcaccacaaccggctgtatcatgccgaggattcgccggagatttccgat
gcggattacgatgccttggcgcgccggaacaatgagctggaagcggctttcccgcatctg
attcgcgccgacagtcccagccggatggtgggggcggcggtggaggcatcgccgctcacc
aaagttcggcacgagcagcggatgatgagcctcgacaacggcttttcggacgaggacatc
gccgagttcgtcgtacgggtgcggcgctatctggcgctgcccgaggacgagatgctcgcg
ctgactgccgaggacaagatcgacgggctgtcgctctcgctgcgttacgagcagggcgtg
ctcgtgcgcgccgcgacgcgcggcgatggcgaggtgggcgaggacgtcaccgccaatgtg
cggatgattgcggatattccggagcgccttgccggaaaagcgcccgaaatcttcgaaatt
cgcggcgaggtctacatgtccaaggcggacttcaccgcgctcaacgcggcgcaggccgag
cgggacgagaaactgttcgccaatccgcgcaatgccgccgccggatcgctgcggcagaag
gacgccagggtcaccgccgcgcgtccgctgcgattcctcgcgcatggctggggcgtggcg
agcgaggttccgggcgatacgcagcacgaagtgatgcaggcgattgctgcgatgggcgtg
cccgtctcgccgctgttgcatcgcgtcgaatcgctcgaagaccttctcgcgcattaccgc
agcatcgaggtgcagcgcgcggacctgccttatgatatcgacggcgtggtctacaaggtt
gaccggctcgactggcaggcgcggctgggctttgttgcaaaggcgccgcgctgggcgctg
gcgcacaagttcccggccgagcgcgccgaaaccacgctgcaggcgatcgatatccaggtc
gggcgcaccggcaagctgaccccggtcggcaggctcaccccggtgacagtcggtggcgtc
gtggtctccaacgtcaccttgcacaaccgcgacgagatcgcgcggctgggcgtgcgcccc
ggcgaccgggtggtcgtccagcgcgcgggcgatgtcattccgcaggtggtcgagaacctg
acccgcgaggaaccgcgcggcccttatgccttccccgatcattgcccggtgtgcgccagc
gaggcggtcgccgaggagggcgaggtcgatgtccgctgcaccggcgggctgatctgccct
gcgcaacagcgcgagcgattgaagcatttcgtcagccgcgccgcgctcgatatcgatggg
ctgggtgaacgcacgatcgccgagttcctggacgcaggcttcatcgagaaaccgggcgat
atctttcggcttaagcagcaccgctccgccatcctcgcgcgcgagggctggcaggaaaag
tcggtcgacaacctgctcgccagcatcgaggcgcgacgaggggcagacccggggagattc
ctgttcgctctgggcatccgtcatgtcggatcggtcacagcgaaggatctggtcaaggcg
ttcggcagcgtcgaggcggtgggcaccatcggccaccggctggcatcgggcgatgccgaa
gcggtggccgaggtcaccggaatcgacggcatcggtcccgcggtcgccgaagccctgggc
gatttcttccacgaaccgcataacgcagcggtgttcgacgacctgatcgccgaggtccgc
cccgccgccttcgtctcgaccgcgcgcgaaaccgagtggagcggcaagaccatcgtgttc
accggaaagctggagacgatgagccgcgacgaagccaaggcgcaggccgaaaggctgggg
gcgaaatcggccggttcggtctcggccaagaccgatctggtggtggccgggcccggcgcg
ggatcaaagctcaaaaaggccgcagagctcggtgtgcgggtggtcgacgaggccgaatgg
gcggaaatcatgcgcaacgcctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (33)   

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