KEGG T00200: BLi01494

Bacillus licheniformis DSM13: BLi01494

Entry

BLi01494 CDS T00200

Gene name

ligD

Definition

ATP-dependent DNA ligase (EC:6.5.1.1)

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

bld Bacillus licheniformis DSM13

Pathway

bld03410	Base excision repair
bld03420	Nucleotide excision repair
bld03430	Mismatch repair
bld03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:bld03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:bld03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:bld03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:bld03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M mRNA_cap_enzyme DNA_ligase_A_C LTD

Other DBs

NCBI-GI:

52785259

NCBI-GeneID:

3098892

UniProt:

Q65KL9

Position

complement(1465910..1467760)

AA seq 616 aa
MGITMQPVLTTSAPSGGNWRYEVKYDGYRGLLKIAATGEVSLISRNSQPLENTFPEISEF
AKSMIETLKEHLPITIDGEIVSLTNRFRSRFEYVQKRGLSKKAELIAQAAAKKPCQYLAF
DLLVFNGESLTSLPYTERKRMLFDLMKELGLPMAPDPMAHARIQYIPDTSDFHDLWKAVK
RFDGEGIVAKKKDSRWAENKKTAEWLKLKNYKKAAVFMTGYNMANRYLTIAVYDRGQIKE
VGSVSHGLGEQERNAILSIVKQYGTETKPGEYTIDPSICMTVHYLTIHYGTLREVSFVSF
EFDMAWENCTYNRLLLHSRNVHPDLQLTSLDKVIFPKSDKTKADYIGYLNEIGDFLLPFL
DNRALTVIRYPHGSGGESFFQKNKPDYAPEFITSIRDDEHEHIICSDYSVLLWLANQLAL
EFHIPFQTVDTAHPTEIVFDLDPPSKSEFPLAVRAAKELHRLFDQLGLLSFPKLSGNKGI
QIYIPISKNAFTYEETRLFTSFAASYCVSLFPDLFTTERLIKNRGGKLYIDYVQHAPGKT
IICPYSTRGNELGTVAAPLFWDEVHSDLSPLNFTMEAVVKRTKELGCPFESFFRQPQDKQ
IKAILDHLKENNRSEN

NT seq 1851 nt +upstreamnt +downstreamnt
atgggaattacgatgcagcctgtattgactacatcagctccctcaggcggcaattggcgg
tatgaagtcaaatatgacgggtatcggggtcttttaaagattgctgcgaccggcgaagtt
tcgctcatcagcagaaactcacagccgctcgaaaacacatttccggaaatttcggaattt
gcaaaaagcatgatcgaaactctcaaagaacacttgccgatcacgattgacggggaaatt
gtgtcgttgacaaaccgttttcgttcccgatttgaatatgtccaaaaaaggggtttgagc
aaaaaggccgagttgattgcacaagcagccgcaaagaaaccgtgccagtacttggctttt
gatttactggtttttaacggagaaagtttaacctcgctcccctataccgaacgaaaacgc
atgcttttcgacctgatgaaagagctcggcctgccgatggctcccgatccgatggctcac
gctcgaattcaatacatccctgacacttctgatttccacgacctttggaaggctgttaaa
aggtttgacggcgagggaattgtcgcgaagaaaaaagacagccgctgggctgaaaataaa
aaaacggccgaatggctcaaactcaaaaactacaaaaaagctgctgtatttatgacaggc
tacaacatggcaaaccgttatttgacaatcgccgtctatgaccgcggccaaatcaaggaa
gtcggttcggtttcccacggactcggagaacaggaaagaaacgccattctttcgatcgtc
aagcaatacggaaccgaaacaaaacccggtgaatataccattgatccgtcgatttgcatg
acggtccattacttaacgattcattacgggacattgcgcgaggtgtcgtttgtttcattt
gaatttgacatggcatgggaaaattgcacttacaaccgcctgctgcttcattcaagaaac
gtccatcccgatttgcagctgacaagccttgataaagtcatctttcctaaaagcgataaa
acaaaagcggattacatcggataccttaatgaaatcggcgattttctgcttccgtttctc
gacaatcgggcgcttaccgttatccgttatccgcacggttccggcggagagtcttttttt
caaaaaaacaagcccgactacgcacccgaatttatcacgtccattcgggatgacgagcac
gagcatatcatctgcagcgattattcggttctgctgtggcttgccaatcagcttgcgttg
gagttccatatcccttttcaaacggtggatacggcccatccgaccgaaatcgttttcgat
cttgatccgccttcaaagtcggagtttccgctggccgtcagagccgcgaaagagctgcac
cgtttatttgatcagctcggcctcttatcttttccaaagctgtcgggaaataaagggata
caaatctatattccgatttcaaaaaacgcctttacttatgaagaaacccgccttttcaca
agctttgcggcttcttattgcgtctcgctttttcccgatctgttcacaaccgaacgcctg
atcaaaaacaggggcggaaagctctatattgactatgtgcagcatgccccgggaaaaacg
atcatctgcccgtattccacaagaggcaatgagcttggcacagtggccgcaccgctgttt
tgggatgaagtccattcagacttgtcacccttaaattttacgatggaggctgtcgtcaaa
cgcacaaaggaactcggatgccctttcgaaagcttcttcagacagccccaggacaaacag
atcaaagctattctcgatcacttaaaagaaaacaaccgttcggaaaactga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

Download RDF

DBGET integrated database retrieval system