KEGG   Bifidobacterium longum subsp. infantis 157F: BLIF_1399
Entry
BLIF_1399         CDS       T01420                                 
Name
(GenBank) putative DNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
blf  Bifidobacterium longum subsp. infantis 157F
Pathway
blf03420  Nucleotide excision repair
blf03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:blf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BLIF_1399
   03430 Mismatch repair
    BLIF_1399
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:blf03400]
    BLIF_1399
Enzymes [BR:blf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BLIF_1399
DNA repair and recombination proteins [BR:blf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BLIF_1399
   MMR (mismatch excision repair)
    Other MMR factors
     BLIF_1399
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_12 Viral_helicase1 AAA_30
Other DBs
NCBI-ProteinID: BAJ71538
Position
complement(1632790..1634364)
AA seq 524 aa
MEQAQGILEGLDERQRTAATTLQGPVRIIAGAGAGKTRTVTRRIAYACATGAWKPERVLA
VTFSVKAAAEMRARLGQLGVGGGTGRSGLGAGTAGVTAATFHSAALHQLNSVWADICEAP
FPHVIEDQRDVVSRAIIRATARTDADPLTVRDVLAEINWAKISLVAVEDYARACAIAHRQ
PPAGLDTARFADVYSAYEQEKTSRGEIDFDDILLLVCHIMDGFPEAAAQIRSTIGWLTVD
EYQDVSPLQHRLLTLWLGGGGPDGKSAMNRNVCVVGDPAQTIYSFAGASSWDLLRFADEF
GPLAADVNLNTDYRSTPEVVNLANRVLAAAPNREDYLKLVSARESGPRVTRTAYESDMEE
AQGVAARIARLVANGAKPSDCAILTRINAQQPVFGAALRAARLKYRVRKDSGWQSSALAD
DAASKRALLEAMGLDATGLAANDDLGVTISTIHASKGLEFKHVFLIGCSEGLLPYGSPET
GDALEEERRLMYVGITRAEDSLHLSYARTKDGYGVQRRRPSRFL
NT seq 1575 nt   +upstreamnt  +downstreamnt
atggaacaggcgcaggggattcttgaggggctcgatgagcggcagcgtaccgccgcgact
acgttgcaagggccggtgcgcattatcgccggcgcaggtgccggtaaaacacgcacggtc
acgcggcgaatcgcctatgcctgcgccaccggggcatggaagccggagcgggtgcttgcc
gtcaccttttcggtaaaagcggcggcggaaatgcgcgcacgattgggccagctcggcgta
gggggaggtactggacgttccggtttgggtgcgggaactgccggagtcacggccgcgacc
ttccactcagcggcattgcatcagctcaacagcgtctgggcagacatatgcgaggctcca
tttccgcatgtgatcgaagatcagcgtgacgtcgtctcccgcgcgatcatccgcgccacc
gcacgtaccgatgccgatccgctgaccgttcgcgatgtgctcgccgaaatcaattgggcc
aaaatctcgttggtggcggtggaagattatgcccgggcatgtgccatcgcccataggcag
ccgcccgccggactcgacaccgctcggttcgccgacgtctacagcgcctacgagcaggaa
aagacctcgcgtggcgaaatcgattttgacgatattctgctgctcgtatgccatatcatg
gatggttttcccgaagccgccgcccaaattcgttccaccatcggctggctcaccgtcgac
gagtatcaggacgtctcgcccctgcaacacaggctgctgaccctgtggctgggcggggga
ggacctgacggcaagagcgcaatgaaccgcaacgtatgcgtcgtgggcgatccggcccag
accatctactcgtttgccggtgcttccagctgggatctgctgcgtttcgccgatgaattc
gggccgctcgccgccgatgtcaatctcaacaccgactatcgttcgacgccggaagtcgtg
aacctcgccaaccgggtgcttgcggccgcgccgaaccgtgaggattacctgaaactggtt
tccgcccgtgaatccggtccgcgcgttacccgaaccgcttatgagagcgatatggaagag
gcacagggcgtggcggcacgcatagcccggttggttgccaacggggccaagccgtccgat
tgcgcgatcctcacccgcatcaacgcccaacagccggtattcggtgccgccttgcgcgct
gcgagactgaaatatcgcgtccgcaaggattcgggatggcaatcatccgcgctcgccgac
gatgccgcgtccaaacgcgcactattggaggcgatgggtttggacgccaccggacttgcc
gcaaacgacgatctcggggttacgatttccacgatccacgcatccaagggtctggaattc
aagcacgtgtttctgatcggctgttcggaagggctcttgccgtatggttcgccggaaacg
ggggatgcgctggaagaggaacgccggcttatgtatgtgggcatcacccgagctgaggat
tcgctgcatttgtcgtatgcacggaccaaggatggttatggagtgcagcgcagacgccca
tcacgatttttgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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