KEGG T00197: BL03857

Bacillus licheniformis ATCC 14580: BL03857

Entry

BL03857           CDS       T00197

Symbol

ywbD

Name

(GenBank) SAM (and some other nucleotide) binding motif,PUA domain

K06969

23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]

Organism

bli Bacillus licheniformis ATCC 14580

Brite

KEGG Orthology (KO) [BR:bli00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bli03009]
    BL03857 (ywbD)
Enzymes [BR:bli01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.191  23S rRNA (cytosine1962-C5)-methyltransferase
     BL03857 (ywbD)
Ribosome biogenesis [BR:bli03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    BL03857 (ywbD)

SSDB

Motif

Pfam:

Methyltrans_SAM PUA_3 Cons_hypoth95 Methyltransf_31 TruB-C_2 MTS

Other DBs

NCBI-ProteinID:

AAU25501

UniProt:

Q65DJ1

Position

complement(3884317..3885507)

AA seq 396 aa
MHTLKIKHPFAAKMKKGYPLIEKEAVSSQENGIKEGSLIRITDENGRFLGKGYYGEQNKG
IGWILTRNEGESIDQSFFLSRLAKAFQARKSLFQDPDTTAFRLFNGEGDGIGGFTIDYYD
GYYLFQWYSKGIYTLKETIMEALDELTDYKAVYEKKRFNTAGQYVEDDDFVKGERGDFPI
IVKENGIHFAVYLNDGAMTGVFLDQRHVRKAVRDRYAEGKTALNTFSYTGAFSVAAALGG
AEKTTSVDVANRSLSRTIEQFSVNGLDYEAHEIKVMDVFKYFQYAAKKELAFDLVILDPP
SFARTKKHTFSAAKDYKNLLKDAIRITKDQGVIVASTNSSAFGMKKFKGFIEEACKETGT
RFTVLEEHSLPEDFKTVKSYPEGDYLKVVFLQVRHR

NT seq 1191 nt +upstreamnt +downstreamnt
atgcatacattaaaaataaaacatccattcgctgcaaaaatgaaaaagggctatccccta
atcgaaaaagaggccgtttcttcgcaagaaaacggcataaaagaaggatcgctgatcagg
ataaccgatgaaaacggcaggtttttaggaaagggctattatggcgagcaaaacaaaggg
atcggctggattctgactcgaaacgagggggaatcgattgaccagtcattctttttaagc
aggctggcgaaagcatttcaagccagaaaatcgctttttcaagacccggatacgaccgct
tttcgtttgtttaacggggaaggcgacggaatcggcggctttacgattgactattatgac
ggctactatttgttccaatggtacagcaaagggatttatacgcttaaagaaacgattatg
gaagcccttgatgaattgacggattataaagctgtttatgagaaaaaacggtttaatacg
gccgggcagtatgtggaagatgacgactttgtcaaaggcgaaagaggagactttccgatc
attgtgaaagagaacggcattcattttgccgtttacctcaatgacggagcgatgaccggc
gtttttctcgatcagcgccatgtccgcaaggcggttagggaccggtatgcggaagggaaa
accgcgctcaacacattctcatataccggcgcattttctgtggcggcggcgctcggaggc
gctgaaaaaacgacgagcgttgatgttgcaaaccgcagcttaagcaggacgatcgaacaa
ttcagtgtgaacgggctggactatgaagctcatgagattaaagtcatggacgtttttaaa
tattttcaatacgcggccaaaaaagaactcgcctttgaccttgtcatccttgatccccct
tcatttgcgagaacgaaaaagcatacattcagcgcggcaaaggattacaaaaatctgtta
aaagacgcgattcgaatcactaaagatcaaggtgtgatcgtcgcttcgacgaacagcagc
gcatttggaatgaaaaaattcaaaggctttatcgaagaggcatgcaaagaaacggggacg
cgctttacagtgcttgaggagcattcgcttcccgaagattttaaaacggtgaaaagctat
cctgagggcgattatttaaaagttgtctttttacaggttcgccatcgttaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

Download RDF

DBGET integrated database retrieval system