KEGG   Bifidobacterium longum subsp. longum KACC 91563: BLNIAS_01207
Entry
BLNIAS_01207      CDS       T01845                                 
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
  KO
K02340  DNA polymerase III subunit delta [EC:2.7.7.7]
Organism
blk  Bifidobacterium longum subsp. longum KACC 91563
Pathway
blk03030  DNA replication
blk03430  Mismatch repair
blk03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:blk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BLNIAS_01207 (holA)
   03430 Mismatch repair
    BLNIAS_01207 (holA)
   03440 Homologous recombination
    BLNIAS_01207 (holA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:blk03032]
    BLNIAS_01207 (holA)
   03400 DNA repair and recombination proteins [BR:blk03400]
    BLNIAS_01207 (holA)
Enzymes [BR:blk01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BLNIAS_01207 (holA)
DNA replication proteins [BR:blk03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BLNIAS_01207 (holA)
DNA repair and recombination proteins [BR:blk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BLNIAS_01207 (holA)
SSDB
Motif
Pfam: DNA_pol3_delta_C DNA_pol3_gamma3 Mn_catalase HrpA_pilin
Other DBs
NCBI-ProteinID: AEI97378
Position
989282..990253
AA seq 323 aa
MAKTAANVPVTVVPGGDSYLNDARTKALCAQALKARPDAELIELDATSADQYAFDEAVSP
SLLSDVAVVKLVNLQNADEKLAEALVTYTKQAAKDPNGSSVVICQHEGGVKGRKIIDQLV
KAGARKEDVPDLKKPDAQLNFVLGEFEKRGRRVEPMAAQQLVSVLGGKTGELAAMCEQLC
FDFDDNPMGLDCVNQYLTANPQVTGFAVADKAVEGKTAEAIVMMRAAVEQGTDPIALIGA
LAMKLRTIAKASAVRAGTISQAEAKTNPWVLKNAMRQLGGWTSAGLAHCIRMLAWADEQS
KTNGGDPVYALERCIEDISHKGR
NT seq 972 nt   +upstreamnt  +downstreamnt
atggcgaaaacagcagcgaacgtaccggtaaccgtggtgcccggaggcgactcgtatttg
aacgacgcgcgcaccaaggcactgtgcgcacaagcgttgaaggcgcgacccgacgccgaa
ctcatcgagctcgacgccacatcggccgaccaatatgccttcgatgaagccgtcagccca
tcgttgctttccgacgttgccgtggtcaaactcgtcaacctgcagaatgccgacgaaaag
ctcgccgaagctttggtgacgtacaccaagcaggccgccaaggatccgaacggctccagc
gtggtgatctgccagcacgagggcggcgtcaaagggcgcaagatcatcgaccaactggtg
aaagccggcgctcgcaaagaggacgtgccggatttgaagaaaccggatgcccaactcaat
ttcgtactcggagaattcgagaaacgcggtcgtagagtcgaaccgatggccgcgcagcag
ctggtatccgtgctcggcggcaaaaccggcgaactcgccgccatgtgcgagcaattgtgt
ttcgactttgacgataatccgatggggctcgactgtgtcaaccagtatttgaccgccaat
ccgcaggtcaccggttttgccgtggcagacaaggccgtggaaggcaaaaccgcagaagcc
atcgtcatgatgcgtgcagctgtggaacaagggaccgatcccatcgcgctgatcggcgcg
ttggccatgaagctccgtaccattgccaaagcctcggcggtccgggccggcacgatttca
caggccgaagcgaaaaccaatccgtgggtgctgaagaatgcgatgcgccaacttggcggc
tggacttcggcaggactcgcgcattgcatccgtatgctcgcctgggcggatgagcaaagc
aaaacgaacggcggcgacccggtatatgcgctggaacgctgcattgaagacatcagtcat
aaaggtcggtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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