KEGG   Bifidobacterium longum subsp. longum JDM301: BLJ_0841
Entry
BLJ_0841          CDS       T01240                                 
Name
(GenBank) putative transcriptional regulator
  KO
K03655  ATP-dependent DNA helicase RecG [EC:5.6.2.4]
Organism
bll  Bifidobacterium longum subsp. longum JDM301
Pathway
bll03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bll00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BLJ_0841
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bll03400]
    BLJ_0841
Enzymes [BR:bll01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BLJ_0841
DNA repair and recombination proteins [BR:bll03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     BLJ_0841
SSDB
Motif
Pfam: HATPase_c_4 SLFN_AlbA_2 MarR HTH_24 HTH_9
Other DBs
NCBI-ProteinID: ADH00307
UniProt: D6ZTV1
Position
complement(1017645..1019201)
AA seq 518 aa
MNWGEPAGLEASGRRIMGHNGVKEAAMVDDYTAKMTELIELMRLIGNDTQQCEVKECKRK
ISSTITDTLSAFSNGSGGWIILGLSEKNGFTPVEGFDARAMQEALSQACEKMTPVVRPVI
VTCPFEGVNLVFARIDEMLPRDKPCFTTALGPHGGSFIRTGDGDRRMTSYEVDRLIEEHL
QPTYDLDIVPGATTDDLDPQLVSGLLARVREQHPRVFADRDGIDVLLDLQVLRHDDSDES
EVGGILRPTLAGLLALGRYPQKFYPRLGISIAVFPGTSRDDVFRGDERLVASKSVVGSIP
VMIDDAVDSLMRWIGAKKPDYPPLVLREAIANALTHRDYSPDARGTQVHINVFTNRIEIT
NPGGLYGMVTHDVLASPHPVTGAPFVSTRNQFLFTLLESTPYPGGGFVNPEGGDGYQRIA
AALREAGIEPATTRNDINTFTMTITKQRTMANSSPGDVVKAIMTVLERHSAMSVKEIMRE
LQLTPLAATSGMRELMKEGRVARVKFADDSVQRYRLKG
NT seq 1557 nt   +upstreamnt  +downstreamnt
atgaattggggtgaaccggcggggctggaggcgagcgggcggcggattatggggcacaat
ggtgtcaaggaggccgccatggtcgatgactatactgccaaaatgactgagctgatcgaa
ctcatgcgtctgatcggcaacgatacgcagcagtgcgaggtcaaggaatgcaagcgcaag
atctcctcgaccatcaccgatacgttgtccgcgttctccaacggctccggcggctggatc
atcctgggcctgtctgaaaagaacgggttcacgccggtcgagggattcgacgcgcgcgcc
atgcaggaggcgctgagccaggcgtgcgagaagatgacgccggtggtgcggcccgtgatc
gtcacctgcccgttcgaaggcgtgaatctggtgttcgcgcgcatcgacgagatgctgccg
cgcgacaagccctgcttcaccaccgcgctcggaccgcacggcggctcgttcatccgcacc
ggcgacggcgaccggcgcatgacctcctatgaggtcgaccggctcatcgaggagcatctg
cagcccacatacgatctggatatcgtgcccggcgccacgaccgatgacctcgacccgcag
ctcgtttccggattgttggcgcgcgtgcgcgaacagcatccgcgcgtgttcgccgaccga
gatggcatcgatgtgctgctggatctgcaggtgttgcgccatgatgattccgacgagtcg
gaggtcggcggaatactgcgtcccaccttggccgggctgctggcgttgggccgctatccg
cagaagttctatccgcggctcggcatttcgatagccgtgtttccggggacgagccgggac
gatgtgttccggggcgacgaacgattggtcgcctcgaagtcggtggtcggttcgattccg
gtgatgatcgacgatgcggtcgactcgctgatgcgttggattggcgcgaagaagcccgat
tatccgccgctcgtgttgcgcgaggcgattgcgaacgcgctcacgcaccgcgattactcg
cctgacgcgcgaggcacgcaggtgcatatcaacgtgttcaccaatcgcatcgagatcacc
aatccgggcggtctgtatggcatggtgacacatgatgtgctggcgagtccgcatccggtg
acgggtgcaccgttcgtctccacccgaaaccagttcctgttcacgctgctggagtccacg
ccgtatccgggcggcgggtttgtgaacccagaaggcggcgacggctaccagcgtatcgcc
gccgcgttgcgcgaggccggtatcgagccggcgaccacgcgcaacgacatcaacacgttc
acgatgaccatcaccaagcaacgcacgatggcgaacagttcgccgggcgacgtggtcaag
gcgattatgaccgtactggagcggcattcggcgatgagcgtcaaggagatcatgcgcgaa
ctgcagttgacgccgctggccgccacatccggcatgcgcgagctgatgaaggaagggcgg
gtcgcccgagtcaagttcgccgacgactcggtacagcggtatcggctgaaaggctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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