KEGG   Bifidobacterium longum subsp. longum JCM 1217: BLLJ_0005
Entry
BLLJ_0005         CDS       T01419                                 
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
blm  Bifidobacterium longum subsp. longum JCM 1217
Brite
KEGG Orthology (KO) [BR:blm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:blm03032]
    BLLJ_0005
   03400 DNA repair and recombination proteins [BR:blm03400]
    BLLJ_0005
Enzymes [BR:blm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     BLLJ_0005
DNA replication proteins [BR:blm03032]
 Prokaryotic type
  DNA Topoisomerases
   BLLJ_0005
DNA repair and recombination proteins [BR:blm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      BLLJ_0005
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim HATPase_c_3
Other DBs
NCBI-ProteinID: BAJ65676
Position
5277..7367
AA seq 696 aa
MADETSKEEQLKAAAERINNAELTEGELDESMAPEHYEASDLRVLEGLEAVRIRPGMYIG
STGPRGLHHLVYEIVDNSVDEALAGYASHIEITILPDNGIRVVDDGRGIPVDEVPGEGVS
GVETVMTKLHAGGKFGGGGYAVSGGLHGVGISVVNALSTRVDIEVRRQGFHWTQTYIDQH
PTAPLKQGEPMTEGESTGTSVTFWADPKIFETTIYDFETLRSRFQQMAFLNKGLKISLTD
ERENDQAGDEVAGDAADEPGAKHQTVTYQYLNGIKDYVDYLVKVRKAMPVEEDVISFEAE
DLKLGISAELAMQWTTAYSEAVHTFANTISTTEGGTHEEGFRAALTSLVNRYARDKGILK
DKDENLSGDDVREGLTAVISVKLTNPQFEGQTKTKLGNSEAKTFVQRVMTDKLGDWFDAH
PAEAKNIIQKAIEASRARLAAKKARENTRRKSIFESAGMPDKLKDCQSNNPEECELFIVE
GDSAGGSAIQGRNPITQAILPLRGKILNTERASLDRMMKSDTIESLITAVGGGYGEDFDI
SKVRYHKVIIMADADVDGAHIATLNLTLFFRYMRPMITAGYVYVAMPPLYRLKWTKGPHD
FVYTDAERDRVLAEGKANGRQLPKGEGIQRYKGLGEMSYQELWETTMDPEHRILKQVHIE
DAAAADETFSMLMGDEVEPRRLFIQRNAKNVRWIDA
NT seq 2091 nt   +upstreamnt  +downstreamnt
ttggcagacgaaaccagcaaagaggagcagctgaaggcggctgcggaacgcatcaacaat
gcggaattgaccgaaggcgaacttgacgaatccatggcccccgagcattatgaggcctcc
gatctgagggtgctcgaaggacttgaggccgtgcgtatccgccccggtatgtacatcggt
tccaccggcccgcgcggtttgcaccacctggtctatgagatcgtcgacaactcggtcgac
gaggcgctggccggatacgccagccatatcgagatcaccattctgccggacaacggcatc
cgtgtggtggacgatggtcgaggtatcccggtcgatgaggtgcccggcgagggcgtctct
ggtgtggagaccgtgatgaccaagctgcacgccggcggcaagttcggcggcggcggttat
gcagtgtccggcggtctgcacggcgtgggcatctccgtggtcaacgcactctccacccgc
gtggacatcgaagtgcgccgtcagggcttccactggacccagacgtacatcgaccagcac
cccaccgcgcccttgaagcagggcgagccgatgaccgaaggcgagtccaccggtacgtct
gtgactttctgggccgacccgaagattttcgagaccaccatctacgacttcgagacgctg
cgttcccgcttccagcagatggccttcctgaacaagggcctcaagatcagcctgaccgac
gagcgtgagaacgaccaggccggcgacgaggtggccggcgacgccgcggacgagcccggc
gcaaagcaccagaccgtcacctaccagtacctcaacggcatcaaggactacgtcgactat
ctggtcaaggtgcgcaaggccatgccggtggaagaggacgtcatcagcttcgaggccgaa
gacctgaagctcggcatctccgccgaactcgccatgcagtggaccactgcctactccgag
gccgtgcacaccttcgcgaacacgatttccaccaccgagggcggcactcacgaggagggc
ttccgcgccgcgctgacctcgctggtcaaccgttacgcgcgagacaagggcatcctcaag
gacaaggacgagaacctctccggcgacgacgtgcgtgaaggcctgaccgccgtgatctcc
gtcaagctcaccaacccgcagttcgaaggccagaccaagaccaagctcggcaactccgaa
gccaagaccttcgtgcagcgcgtgatgaccgacaagctcggcgactggttcgatgcccac
ccggccgaggccaagaacatcatccagaaggccatcgaggcatcccgcgcccgtctggcc
gccaagaaggcccgcgagaacacccgccgcaagtccatcttcgagtccgccggcatgccc
gacaagctcaaggactgtcagtcgaacaacccggaagagtgcgagctgttcatcgtggag
ggtgattccgcaggcggctccgccatccagggccgcaacccgatcacgcaggccatcctg
ccgctgcgaggcaagatcctcaacaccgagcgcgccagcctggaccgcatgatgaagtcc
gacaccatcgaatcgctgatcaccgcggtcggcggcggctacggcgaggacttcgacatc
tccaaggtccgctaccacaaggtcatcatcatggccgatgccgatgtggatggtgcgcat
atcgccaccctgaacctgacgctgttcttccgctacatgcgcccgatgatcaccgccggc
tacgtgtacgtggccatgccgccgctgtatcgcctgaagtggaccaagggcccgcacgac
ttcgtgtacaccgacgccgagcgcgaccgcgtgctcgccgaaggcaaggccaacggacgc
cagctgcccaagggcgaaggcatccagcgctacaagggtctgggcgagatgagctaccag
gagctatgggagaccaccatggaccccgagcaccgcattctgaagcaggtgcacatcgag
gacgccgccgcggccgacgagaccttctcgatgctgatgggcgatgaggtcgaaccccgc
cgcctcttcatccagcgcaacgccaagaacgtgcgttggatcgatgcgtaa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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