KEGG   Bifidobacterium longum subsp. longum JCM 1217: BLLJ_1076
Entry
BLLJ_1076         CDS       T01419                                 
Name
(GenBank) pseudouridine synthase
  KO
K06178  23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Organism
blm  Bifidobacterium longum subsp. longum JCM 1217
Brite
KEGG Orthology (KO) [BR:blm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:blm03009]
    BLLJ_1076
Enzymes [BR:blm01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.22  23S rRNA pseudouridine2605 synthase
     BLLJ_1076
Ribosome biogenesis [BR:blm03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    BLLJ_1076
SSDB
Motif
Pfam: PseudoU_synth_2 S4 S4_2 DUF1986
Other DBs
NCBI-ProteinID: BAJ66743
Position
complement(1256259..1257029)
AA seq 256 aa
MPNAYSRAAKAQDDSNSIRLQKLLAQAGFGSRRKCEDMITEGRVEVDGELVTELGTRVDP
HKQQVRVDGSRVRVNPNHVTLALNKPRKVLSAMDDPKGRYTLRDIVGDKYERIFHMGRLD
YDSEGLILMTNDGELSQHVMHPKYEVEKTYVATLEGKISGTVCRRLVTTGVQLDDGWIKL
DHCAIIDSSRDHTMVKVVLHSGKNRIVRRIFGSIGFPVKRLVRTQIGPIKLGDLKPGSYR
VLSQTEVRSLSKEVGL
NT seq 771 nt   +upstreamnt  +downstreamnt
atgccaaacgcatattcccgcgctgcgaaagcgcaagacgattccaattccattcgactc
cagaagctgcttgcccaagcgggattcggttcccgccgcaagtgcgaggacatgatcacc
gaaggccgtgtcgaggtcgacggtgaactggtcaccgagctcggaactcgcgttgaccct
cataagcagcaggtgcgcgtagacggttcgcgcgtacgcgtcaatccgaaccacgtcact
ctggcgctgaacaagccccgcaaggtgctctccgccatggacgacccgaagggccgctac
acgctgcgcgacatcgtgggcgacaagtacgagcgcatcttccacatgggccgtctcgac
tacgattccgagggtcttatcctcatgacgaacgacggcgagctctcgcagcacgtcatg
caccccaagtacgaggtcgagaagacctacgtcgctacgctggaaggcaagatctccggc
accgtgtgccgtcgactcgtgaccaccggcgtgcagctcgacgacggctggatcaagctc
gaccactgcgcgatcatcgactcctcgcgtgaccacacgatggtcaaggtcgtgctgcac
tccggcaagaaccgcatcgtgcgacgtatcttcggctcaatcggcttcccggtcaagcgc
ttggtgcgcacccagatcggcccgatcaagctcggtgatttgaagcccggttcctaccgc
gtgctgtcccagacggaagtccgttcgctgtccaaggaggttggtctgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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