KEGG   Bifidobacterium longum NCC2705: BL0303
Entry
BL0303            CDS       T00094                                 
Symbol
ffh
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
blo  Bifidobacterium longum NCC2705
Pathway
blo02024  Quorum sensing
blo03060  Protein export
blo03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:blo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    BL0303 (ffh)
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    BL0303 (ffh)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BL0303 (ffh)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:blo02044]
    BL0303 (ffh)
Enzymes [BR:blo01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     BL0303 (ffh)
Secretion system [BR:blo02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   BL0303 (ffh)
  Eukaryotic Sec-SRP protein
   BL0303 (ffh)
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA AAA_22 MeaB nSTAND3 cobW AAA_31 ArsA_ATPase AAA_24 Zeta_toxin APS_kinase AAA_18 AAA_30
Other DBs
NCBI-ProteinID: AAN24143
UniProt: Q8G7G3
Position
1227661..1229409
AA seq 582 aa
MPNIPDYYAAHSPKSVVPNTAISRVAARLLPIMAAFSSLTDRLSNAFKHLKSKGKLSEAD
IDGTIREIRRALLDADVALDVVRSFTGKVRERALGTEVSDALNPAQQVVKIVNEELTDVL
GQGVDRPLNFAKNPPTIIMLAGLQGAGKTTLAGKLGYWLKDSGHTPLLVAADLQRPNAVT
QLQVVGERAGVPVYAPEKGVQSDGGEAVAAPGQTSGDPVKVARDSIELAKQKLYDTVIID
TAGRLGVDEELMKQARDIRDAVRPNEILFVIDAMIGQDAVKTAKAFDEGVDFTGVVLSKL
DGDARGGAALSVASVTGKPILFASNGEGLKDFEVFHPDRMASRILDMGDIMTLIEQAQKQ
FDEEEARKAAEKISEGSFGLDDFLDQLQQVRKLGSMKSLLGMIPGMAQHRKELEQFDERE
IDRTEAIIRSMTPAERRDPSIINGSRRARIAYGSGVTVSQVNALLQRFEQAAKMMKRMSN
RGGMGGGIPGFGGPAMGGGKKKGKNKKKGGKSGNPMKREAEEKALRDKLAGKSSGSTGGS
AFAKKPQNPALPAGLEQMMGNVDGGTELPPNLGGGLGGLFGR
NT seq 1749 nt   +upstreamnt  +downstreamnt
atgcccaacatccctgactactacgcggcacattccccgaaaagcgtcgtccccaacacc
gcaatttcccgcgtggcggctagactgttgcccattatggcagctttttcatctttgaca
gacagactctcgaatgcgttcaagcatctgaagagcaagggcaagctttccgaggcggat
atcgacggcacgatccgtgaaatccgccgcgcgctgctcgacgccgacgtggcgctcgac
gtggtgcgttccttcaccggcaaggtgcgtgagcgtgcactgggcaccgaggtgtccgac
gcactcaaccccgcccagcaggtggtgaaaatcgtcaacgaggagctcaccgacgtgctc
ggccaaggcgtcgatcgtccgctgaacttcgcgaagaacccgccgacgatcatcatgctc
gccggccttcagggtgccggtaaaaccacgctggccggcaagctcggctactggctcaag
gattccggccacacgccgctgctggtggcggccgatttgcagcgtccgaacgcggtgacg
cagctgcaggtggtcggcgaacgcgccggtgtgcccgtctatgctcccgaaaagggcgtc
caatccgatggcggcgaggccgtcgcagctccgggccagacctccggcgacccggtgaag
gtggcccgcgattccatcgaactcgccaagcagaagctctacgacacggtgatcatcgat
accgccggtcgtctgggcgtggacgaggagctgatgaagcaggctcgcgacattcgcgat
gccgtgcgtcccaacgaaatcctgttcgtcatcgacgcgatgatcggccaggacgccgtc
aagaccgccaaggcctttgacgaaggcgtggacttcaccggcgtggtgctctccaagctc
gatggcgacgcccgcggtggtgccgcgctgtccgtggcgtccgtgaccggcaagccgatc
ctgttcgcctccaacggtgagggcctgaaggacttcgaggtcttccacccggaccgcatg
gcctcgcgtatcctcgacatgggcgacatcatgacgctcatcgagcaggcgcagaagcag
ttcgatgaggaagaggcccgcaaggccgccgagaaaatctccgaaggttccttcggcctg
gacgacttcctcgatcagctgcagcaggtgcgcaagctgggctcaatgaagtcgctgctc
ggcatgattccgggcatggcccagcaccgcaaggaactcgagcagttcgatgagagggaa
atcgaccgcaccgaggcgattattcgctcgatgaccccggccgagcgccgcgatccgtcg
attatcaatggttcccgccgcgcccgtatcgcctatggttccggcgtgacggtttctcag
gtgaacgctttgctgcagcgtttcgagcaggccgcaaagatgatgaagcgcatgtccaat
cgtggcggcatgggcggcggcatccccggcttcggcggcccggctatgggcggcggcaag
aagaagggcaagaacaagaagaagggcggcaagtccggcaatccgatgaagcgcgaggcc
gaggagaaggcattgcgcgataagctggccggcaagtcctccggttcgaccggcggttcc
gccttcgccaagaagccacagaacccggccctgcccgctggccttgagcagatgatgggc
aacgtcgacggtggcactgaactgccgccgaacctcggcggaggccttggcggactgttc
ggtcgctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (51)   

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