KEGG   Salinivirga cyanobacteriivorans: L21SP5_00685
Entry
L21SP5_00685      CDS       T04172                                 
Symbol
rluD
Name
(GenBank) Ribosomal large subunit pseudouridine synthase D
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
blq  Salinivirga cyanobacteriivorans
Brite
KEGG Orthology (KO) [BR:blq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:blq03009]
    L21SP5_00685 (rluD)
Enzymes [BR:blq01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     L21SP5_00685 (rluD)
Ribosome biogenesis [BR:blq03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    L21SP5_00685 (rluD)
SSDB
Motif
Pfam: PseudoU_synth_2 S4 Ub-Mut7C MerR-DNA-bind TruB_N
Other DBs
NCBI-ProteinID: ALO14357
UniProt: A0A0S2HWM4
Position
complement(826632..827654)
AA seq 340 aa
MENKEQEMYEHYQFHADPGQKPLRIDRFLVVRIENASRNKIQEAAQAGFILVNGTPVKPN
YKVKPGDEVRVMMSQPPREIEIIPEDIPLDIVHEDESLIVVNKPAGLVVHPGYGNYTGTL
VNALAYHFRDLPMFKDNTDPRPGLIHRIDKNTSGLLVIAKTETAKVKLAAQFADHTSQRT
YQAVIWGSPKTDEGTITGHIGRSLKNRKVMTVFPEGEYGKHAVTHYKVLQRYDYVSLIEC
KLETGRTHQIRAHMKYIGHPIFNDNEYGGDRILKGTTFTKYKQFVRNCFEVCPRQALHAK
TLGFKHPESGEMMSFNSDLPQDMSQLLERWTNYLQNRINK
NT seq 1023 nt   +upstreamnt  +downstreamnt
atggaaaataaggagcaggagatgtatgaacactatcagtttcatgccgatccggggcaa
aaaccattgcgaatagaccggtttttggttgtaagaatagaaaacgcaagtcgtaataaa
atacaggaggctgcccaggcaggttttattttagtaaatgggacacccgtaaagccaaat
tataaggtgaaacccggcgatgaggtacgggttatgatgagtcaacccccacgcgaaatt
gagattattcctgaagatattccgcttgatattgtgcatgaagatgagtcgctgatcgtg
gtaaataaacctgccggacttgttgtccatcccggttatggcaactataccggtacgctg
gtaaatgccctcgcatatcattttcgcgatttgcccatgtttaaagataataccgatccc
agaccgggactaatacaccggatcgataagaatacttccggattgttggtgattgctaaa
acagagactgcaaaagtaaaactggcggctcagtttgcagatcatacgtcacaacgtacc
taccaggctgtaatttggggaagcccaaaaactgatgagggtacaattacgggacatata
ggccggtcacttaaaaaccggaaagtaatgacggttttccctgaaggtgagtatggtaag
catgccgttacgcattataaagtgcttcagcgctacgattatgtttcacttatagaatgc
aagcttgaaaccggcagaacacaccagattcgtgcgcacatgaaatacatcggtcatcca
atattcaacgacaatgaatatggcggcgatcgcatccttaaaggcacaacatttacaaaa
tacaaacagtttgttcgcaattgttttgaggtttgtccacgccaggcacttcacgctaaa
acactgggctttaagcatcctgaaagcggagaaatgatgagctttaattctgatctgcca
caagacatgtcgcagttacttgaaaggtggacaaattaccttcaaaacaggataaacaaa
taa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   RefGene (36)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (50)   

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