KEGG   Burkholderia mallei ATCC 23344: BMA1365
Entry
BMA1365           CDS       T00204                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
bma  Burkholderia mallei ATCC 23344
Pathway
bma03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bma00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BMA1365 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bma03021]
    BMA1365 (rho)
   03019 Messenger RNA biogenesis [BR:bma03019]
    BMA1365 (rho)
Transcription machinery [BR:bma03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     BMA1365 (rho)
Messenger RNA biogenesis [BR:bma03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     BMA1365 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N NACHT OB_RNB ATPase_2 AAA_22 AAA_25 Phostensin_N
Other DBs
NCBI-ProteinID: AAU47600
UniProt: A0A0H2WF96
Position
1:1422902..1424164
AA seq 420 aa
MHLSELKSLHVSELIEMANGLEIENANRLRKQELMFAILKKRAKTGETIFGDGTLEVLPD
GFGFLRSPEMSYLASTDDIYISPSQIRRFNLHTGDTIEGEVRTPKDGERYFALVKVDKVN
GQPPKASKHKIMFENLTPLHPNKPLSLEREMRGEENVTGRIIDMIAPIGKGQRGLLVASP
KSGKTVMLQHIAHAIKQNHPDVILFVLLIDERPEEVTEMQRSVAGEVIASTFDEPATRHV
QVAEMVIEKAKRLVEMKHDVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLTIIGTALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPSINL
NKSGTRREEMLIKPEILQKIWVLRKFIHDMDEVEAMEFLLDKIRQTKNNAEFFDLMRRGG
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgcatttatccgagctcaagtctctgcacgtctccgaattgatcgaaatggccaatggt
ctggagatcgaaaacgcgaaccgcctgcgcaagcaggagttgatgttcgccattctcaaa
aagcgcgccaagacgggagaaacgatcttcggcgacggcacgctcgaagtgctgccggac
ggtttcggcttcctgcgctcgccggaaatgtcgtatctcgcgagcacggacgacatctac
atcagcccgtcgcagatccgccgcttcaatctgcacaccggcgacacgatcgaaggtgaa
gtccgcacgccgaaggacggcgagcgctacttcgcgctggtgaaggtcgacaaagtcaac
gggcagccgcccaaggcctcgaaacacaagatcatgttcgagaacctcacgccgctgcac
ccgaacaagccgctgtcgctcgagcgcgaaatgcgcggcgaggaaaacgtcacgggccgt
atcatcgacatgatcgccccgatcggcaagggccagcgcggcctgctcgtcgcgtcgccg
aagtccggcaagaccgtgatgctccagcacatcgcgcacgcgatcaagcagaaccatccg
gacgtgatcctgttcgtgctgctgatcgacgagcgccccgaggaagtgaccgaaatgcag
cgctcggtcgccggcgaagtgatcgcgtcgacgttcgacgaaccggccacgcgccacgtg
caggtcgccgaaatggtgatcgagaaggccaagcgcctcgtcgagatgaagcacgacgtc
gtgatcctgctcgactcgatcacgcgtctcgcgcgcgcctacaacaccgtgatcccggcg
tccggcaaggtgctgacgggcggcgtcgacgcgaacgcgctgcagcgcccgaagcgcttc
ttcggcgcggcgcgcaacatcgaggaaggcggctcgctcacgatcatcggcaccgcgctg
atcgaaaccggcagccgcatggacgacgtgatctacgaagaattcaagggcaccggcaac
atggaagtgcacctcgagcgccgtctcgcggaaaagcgcgtctacccgtcgatcaacctg
aacaagtcgggcacgcgccgcgaggaaatgctgatcaagcccgagatcctccagaagatc
tgggtgctgcgcaaattcatccacgacatggacgaagtcgaggcgatggaattcctgctc
gacaagatccgccagacgaagaacaacgccgagttcttcgatctgatgcgccgcggcggc
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (28)   

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