KEGG   Burkholderia mallei 23344: DM55_2526
Entry
DM55_2526         CDS       T03323                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
bmal  Burkholderia mallei 23344
Pathway
bmal03030  DNA replication
bmal03430  Mismatch repair
bmal03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bmal00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DM55_2526 (dnaE)
   03430 Mismatch repair
    DM55_2526 (dnaE)
   03440 Homologous recombination
    DM55_2526 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bmal03032]
    DM55_2526 (dnaE)
   03400 DNA repair and recombination proteins [BR:bmal03400]
    DM55_2526 (dnaE)
Enzymes [BR:bmal01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DM55_2526 (dnaE)
DNA replication proteins [BR:bmal03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     DM55_2526 (dnaE)
DNA repair and recombination proteins [BR:bmal03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     DM55_2526 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon DNA_pol_IIIA_C RecG_wedge Nitr_red_assoc
Other DBs
NCBI-ProteinID: AIO50458
Position
1:2772112..2775636
AA seq 1174 aa
MSDPRFVHLRVHSEFSIADGIVRLDDIVKSAAEDGQGALALTDLGNAFGLVRFYKEARDA
GIKPIAGCDVWITNHDDRDKPSRLLLLVKDKRGYLNLCELLSKAWLTNQYRGRAELDASW
LEGELAEGLLALSGAQQGDIGLALAAGNEAAARRHAQRWARVFPGGFYIELQRYGQPGAE
AYIQQAVTIAAELKLPVVATHPLQYMTADDFTAHEARVCISEGDILANPRRQKRFTTEQF
FRTQGDMAALFADLPSALANTVEIAKRCNLTLELGKPKLPRFPTPDGMSLDDYLVQLSQE
GLDKRLVQLYPDEAEREAQRGKYNQRLDFECGTIKKMGFPGYFLIVADFINWAKNNGVPV
GPGRGSGAGSLVAYSLGITDLDPLRYNLLFERFLNPERVSMPDFDIDFCQHGRDRVIQYV
KEKYGADAVSQIATFGTMAAKAAVRDIGRVLDLGYMFTDGVAKLIPFKPGKHVTIADAMK
EEPLLQERYDNEDEVHQLLDLAQRVEGLTRNVGMHAGGVLIAPGKLTDFCPLYTQGDEGG
VVSQYDKDDVEAVGLVKFDFLGLTTLTILDWAERYIRRLDPSKENWSLAQVPLDDPTSFQ
ILKKANTVAVFQLESRGMQGMLKDAQPDRFEDIIALVSLYRPGPMDLIPSFCARKHGREK
VDYPDPRVEPVLKETYGIMVYQEQVMQMAQIIGGYSLGGADLLRRAMGKKKPEEMAKHRE
IFAEGAAKNGLTREKSDEIFDLMEKFAGYGFNKSHAAAYALLAYYTAWLKAHHPAEFMAA
NMTLAMDDTDKVKILFDDCLVNGLAVLPPDINRSNDRFEPVAEADGKRSRTIRYGLGAIK
GSGQNAIEEILRAREEKPFADLFDFCERIDRRVVNRRTIEAMIRAGAFDSLHENRAQLLA
SVPLAMEAAEQAAANALQAGLFDIGGVPAHQHALVDEPAWDDKRRLQEEKGALGFYLSGH
LFDAYRDEVRRFVRQKLGELKEGRDKVVAGVIASLRTQMTQRGKMVIALLDDGTGQCEVT
VFNEQFDANRALFKEDELLIVQGQARNDAFTGGIRFTAESVMDLERARSRYAQAVRMTMN
GNADAAALRRVLEAHVAKPDETPPAAAPAPRGGRDGGRRAQAAIPNGLAVRIAYSNARAQ
GEMRLGDAWRVKPSDALLADLRAAFGGSVVEIVY
NT seq 3525 nt   +upstreamnt  +downstreamnt
atgtcagatccccgtttcgttcacctccgcgtccactccgaattctcgattgccgacggc
atcgtgcgtctcgacgatatcgtcaagtcggcggccgaagacggtcagggcgcgcttgca
ctgaccgacctcggcaacgcgttcggtctcgtccgtttctacaaggaagcccgcgatgcg
ggcatcaagccgatcgccggctgcgatgtctggatcaccaaccacgacgatcgcgacaag
ccgtcgcggctgctgctgctcgtcaaggacaagcgcggctacctgaacctctgcgagctg
ctgtcgaaggcgtggctcacgaaccaataccgcggccgcgcggagctcgacgcgagctgg
ctcgaaggcgagctcgccgaagggctgctcgcgctgtcaggcgcgcagcagggcgacatc
ggcctcgcgctcgcggcgggcaacgaggcggccgcgcgccgccacgcgcagcgctgggcg
cgggtgttcccgggcggtttctatatcgaattgcagcgctacggccagccgggcgcggaa
gcgtacatccagcaggcggtgacgatcgcggcggagctgaagctgcccgtcgtcgcgaca
catccgctgcagtacatgacggccgacgatttcaccgcgcacgaggcgcgcgtgtgcatc
tcggaaggcgacatcctcgcgaatccgcgccgccagaaacgcttcacgaccgagcagttc
ttccgcacgcagggcgacatggccgcgctgttcgccgatctgccctcggcgctcgcgaac
acggtcgagatcgccaagcgctgcaacctgacgctcgagctcggcaagccgaagctgccg
cggttcccgacgcccgacggcatgtcgctcgacgactacctcgtgcagttgtcgcaggaa
gggctcgacaaacgcctcgtgcagctctacccggacgaggccgagcgcgaagcgcaacgc
gggaagtacaaccagcgtctcgatttcgagtgcggcacgatcaagaagatgggctttccg
ggctacttcctgatcgtcgcggacttcatcaactgggcgaagaacaacggcgtgccggtg
ggccccgggcggggctcgggcgcgggctcgctcgtcgcgtattcgctcggcatcaccgac
ctcgatccgctgcgctacaacctgctgttcgagcgcttcctgaacccggagcgggtgtcg
atgcccgacttcgacatcgacttctgccagcacggccgcgaccgcgtgatccagtacgtg
aaggagaagtacggcgcggacgcggtgtcgcagatcgccaccttcggcacgatggccgcg
aaggcggccgtgcgggatatcggccgggtgctcgatctcggctacatgttcaccgacggc
gtcgcgaagctgatcccgttcaagccgggcaagcacgtgacgatcgccgacgcgatgaag
gaagagccgctcctgcaggagcgctacgacaacgaggacgaagtccatcagttgctcgat
ctcgcgcagcgcgtggagggcctcacgcgcaacgtcgggatgcacgcgggcggcgtgctg
atcgcgcccggcaagctgaccgatttctgccccctctacacgcagggcgacgaaggcggc
gtcgtcagccagtacgacaaggacgacgtcgaagccgtcggcctcgtgaagttcgacttt
ctcggcctcacgacgctcacgattctcgactgggccgagcgctacattcgccgtctcgat
ccgagcaaggagaactggtcgctcgcgcaggtgccgctcgacgatccgacgtcgttccag
atcctcaagaaggccaacacggtcgccgtgttccagctggaaagccgcggcatgcagggg
atgctgaaggacgcgcagcccgaccgcttcgaggacatcatcgcgctcgtgtcgttgtac
cggccgggcccgatggacctgattccgagcttctgcgcgcgcaagcacgggcgcgagaag
gtcgactatccggatccgcgcgtcgagcctgtcctgaaagagacctacgggatcatggtc
tatcaggagcaggtgatgcagatggcgcagatcatcggcggctattcgctcggcggcgcg
gacttgctgcgtcgcgcgatgggcaagaagaagcccgaggagatggccaagcatcgcgag
atcttcgccgagggcgccgcgaagaacggcctcacgcgcgagaagtccgacgagatcttc
gacctgatggagaagttcgcgggctacggcttcaacaagtcgcacgcggccgcgtacgcg
ctgctcgcgtattacaccgcgtggctgaaggcgcaccatccggccgaattcatggcggcc
aacatgacgctcgcgatggacgacaccgacaaggtgaagatcctgttcgacgattgcctc
gtcaacggcctcgccgtgctgccgcccgacatcaaccgttcgaacgatcgcttcgagccc
gtcgccgaggccgacggcaaacgctcgcgcacgatccgctacggcctcggcgcgatcaag
ggcagcggccagaacgcgatcgaggagatcctgcgcgcacgcgaggaaaagccgttcgcc
gatctgttcgatttttgcgagcggatcgaccgccgcgtcgtgaaccgccgcacgatcgaa
gcgatgattcgcgcgggcgcattcgattcgctgcacgagaatcgcgcgcagttgctcgca
tcggtgccgctcgcgatggaggccgccgagcaggcggccgcgaacgcgctgcaggcgggc
ctgttcgacatcggcggcgtgcccgcgcaccagcatgcgctcgtcgacgagccggcgtgg
gacgacaagcgtcgcctgcaggaagagaagggcgcgctcggcttctacctgtccggccac
ctgttcgacgcgtatcgcgacgaggtgcgccgtttcgtgcgccagaagctcggcgagctg
aaggaagggcgcgacaaggtggtggccggcgtgatcgcgtcgttgcgcacgcagatgacg
cagcgcggcaagatggtgatcgcgttgctcgacgacggcaccggccagtgcgaagtcacc
gtgttcaacgagcagttcgacgcgaaccgcgcgctcttcaaggaggacgagctgctgatc
gtccaggggcaggcgcgcaacgacgcgttcacgggcggaattcgcttcaccgccgagtcg
gtgatggacctcgagcgtgcgcgcagccgctacgcgcaggcggtgcggatgacgatgaac
ggcaacgcggacgcggcggcgctgcgccgcgtgctggaagcgcacgtcgcgaaacccgac
gagacgccgcccgccgcggcgccggcgccgcgcggcggtcgcgacggcgggcggcgggcg
caggcggcgataccgaatggtctcgccgtgcggatcgcatacagcaacgcgcgtgcgcaa
ggcgagatgcgcctgggcgacgcatggcgcgtgaagccgagcgacgcgttgctcgccgat
ctgcgcgcggcgttcggcggcagcgtcgtcgagatcgtctactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (20)   

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