KEGG   Borreliella mayonii: A7X70_01905
Entry
A7X70_01905       CDS       T04886                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
bmay  Borreliella mayonii
Pathway
bmay03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bmay00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    A7X70_01905
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bmay03021]
    A7X70_01905
   03400 DNA repair and recombination proteins [BR:bmay03400]
    A7X70_01905
Enzymes [BR:bmay01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     A7X70_01905
Transcription machinery [BR:bmay03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     A7X70_01905
DNA repair and recombination proteins [BR:bmay03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      A7X70_01905
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 RPOC_hybrid Biotin_lipoyl_2 Apocytochr_F_C RnfC_N
Other DBs
NCBI-ProteinID: APS98593
UniProt: A0A1L6VT00
Position
complement(398322..402455)
AA seq 1377 aa
MKEIKDFERIKIKIASPDQIRNWSYGEVKKSETINYRTLRPEKDGLFCERIFGTTKEWEC
YCGKFKSVRYKGIICDRCNVEVTHFKVRRERMGHIELAAPVAHIWYYKYIPSRIGLLLDI
TASSLNSILYYEKYVVIEPGDTDLKKMQLLNEDEYIEARERYGMSFNASMGAEAIKTLLE
NLDLDELSSKLRIQMIDKDDKTDKKLLRRLEIIENFKISGNKPEWMIMEVLPVIPPEIRP
MVQLDGGRFATSDLNDLYRRVINRNNRLRKLLLLNAPEIIVRNEKRMLQESVDSLFDNSH
KRKVVKGSSSRPLKSLSDALKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLHQCGLPAK
MALELFKPFVIRRLIESEAVFNIKRAKNLIEQEVDEVWQILDLVIKEHPILLNRAPTLHR
LGIQAFEPVLVEGKAIKLHPLVCHAYNADFDGDQMAVHVPLTPAAQAESWALMLSTNNLL
NPANGHPIVFPSQDIVLGLYYLTMEKKNVVGEGKKFLNFNNVILAINNRSLDYNASIYVK
IAGEYKKTTAGRVIFNEALPNGIEFVNKTLSDLELQILISKVYVVHGSSIVIEMLDIIKE
LGFRYATKFGCTISMSDIIVPDEKRTYVERANKEIAKIQNDYAKGVITGEERYNNVVSVW
LKTNEELTNKMMEILKRDRDGFNVIYMMADSGARGSRNQIRQLAGMRGLMAKTSGDIIEL
PIISNFKEGLSVIEFFISTNGARKGLADTALKTADAGYLTRRLVDIAQDVVVRIEDCGTI
NGIKVETVKNGEEILESLKEKAVGSYSIERIKNPITGEIVLDANEEISEAKIELLEKIGI
EKLVIRSVLTCEAEHGVCQKCYGRDFSKNKPVNIGEAVGIIAAQSIGQPGTQLTMRTFHI
GGVAQAGSEDDKISLKNAFILNGIEGFNVRVDNGILFTRKGTLKIINVFYEEKIKNIKEI
KVLDSQRVIKGIPLFVDNKGVEILSSYIGYVKLRDDNFFIVSEEQEVALKAGTRLEIEVG
DYVESGKVIGTFDPFAEPIIAEVKGKIKFKDIILGTTLKEEINTETGNVEKRITDNVFES
LDPRIFIIDSSGMEVASYVLPGDAYLQVEDGQNINIGDIIAKLSKGSEKTQDITGGLPRV
NDLFETRIPKNLTEMAKVSGIVQFKSIQKGKRLINILDEYGVEHKHYIPAGKHLLVRDGD
IVKAGDMLCDGRINPHDVLEILGGISLQEFLLAEIQDVYRKQGVSINDKHIGVIIKQMMK
KVKIVAVGDTNFVYGQKVDKHTFYEQNRKVIEQGGEPAIASPILIGVTKTSLNIDSFISA
ASFQETTKVLTDASIAGKIDDLRGLKENVVIGHLIPTGTGMGLYKKIKVSENIDSEV
NT seq 4134 nt   +upstreamnt  +downstreamnt
atgaaagagataaaagattttgaaagaataaaaattaaaatagcatctcctgaccaaatt
agaaattggtcttatggagaggttaaaaagtccgagactattaattatagaactttaaga
cccgaaaaggatgggcttttttgtgaaaggatttttgggactacaaaggaatgggaatgt
tattgcggtaaatttaaatcggttagatataagggtattatttgtgatcgttgtaatgta
gaggttacccattttaaggttagacgtgaaagaatggggcatattgagctagcagctcca
gttgctcatatttggtattacaaatatataccctctaggattgggcttttgcttgatatt
acggcatctagtttaaattctattctttattatgaaaaatatgtagtaattgagccgggt
gatactgatcttaaaaaaatgcagcttttaaatgaagatgagtatatagaggctagagaa
cgatatggtatgtcttttaatgcttctatgggagctgaggctattaaaactcttcttgaa
aatcttgatcttgatgagctttcatctaagcttaggattcaaatgatagataaagatgat
aaaaccgataagaaactcttaagacgtcttgaaattattgagaattttaaaatttctggg
aataagccagaatggatgattatggaagttcttcctgttattcctccagagattaggcca
atggttcagcttgatggagggcgctttgcaacatctgatcttaatgatctttacagaaga
gttataaatagaaataatcgtttaaggaagttacttcttcttaatgcgccagagattatt
gtgagaaacgaaaaaagaatgcttcaagaatcggtagactctctttttgataattctcat
aaaagaaaggttgtcaaaggctcatctagtaggcctcttaagtcgctttccgacgcatta
aaaggtaagcagggaaggtttaggcaaaatcttcttggtaaaagagtagattattctggt
cgttctgtgattgttgttgggcctgagctgaagctacatcaatgtggattgcctgcgaaa
atggctcttgaactgtttaaaccttttgttataagaaggttaattgagagtgaagctgtt
tttaatatcaaaagagcaaagaatttaatcgaacaagaagttgacgaggtatggcaaatt
ttagatcttgttatcaaagagcatcctattcttttaaatagggcgcccactcttcatagg
cttggaattcaggcttttgagcctgtgttggttgaaggtaaggcaataaaattgcatcct
cttgtttgtcatgcatataatgctgattttgatggtgatcaaatggcagtgcatgtgcct
cttactccagcagcacaagctgaaagttgggctttgatgctttcaacaaataatctttta
aatcctgctaatgggcatcctattgtttttccatctcaagatattgttttgggcctatat
tatttaacgatggaaaaaaagaatgttgttggagaaggtaaaaagtttttaaactttaat
aatgttattcttgccataaataatagaagtctagattataatgcttctatttatgtaaaa
attgctggcgaatacaaaaaaaccacagccggtagggttatatttaatgaggctttgcct
aatggaattgaatttgtaaataaaactcttagtgatttggagctacaaattttaatatca
aaagtttatgtagttcatggttcttctatcgtaattgaaatgcttgacattatcaaagag
cttggttttaggtatgctactaagtttgggtgcacaattagtatgagcgatattattgtt
cctgatgaaaaaagaacgtatgtagaaagggccaataaagagattgctaaaattcaaaat
gattatgctaaaggtgttattactggtgaagaacgatataataatgtagtttctgtttgg
ctaaagaccaacgaagagcttactaataagatgatggaaattttaaagagagacagagat
ggatttaatgttatatatatgatggcagattctggtgctagaggtagtagaaatcaaata
aggcaacttgctggcatgagaggattgatggcaaaaacttctggagatattattgagctt
ccaattatttctaactttaaagaaggtctttctgtgatagagttttttatatctacaaat
ggagcaagaaagggtttagcagatactgctcttaagacagccgatgctggatatttaact
cgaagattagtagacattgctcaagatgttgttgttagaatagaagattgtgggactata
aacggaataaaagttgaaactgtaaaaaatggtgaagaaatattagaatctttaaaagaa
aaagctgttggaagttattctattgaaagaataaaaaatccaattactggcgagattgtt
ttagatgcaaatgaagaaatctcagaagctaaaatagagttattagagaaaattggtatt
gaaaaacttgtgattagatctgttttaacgtgtgaagctgagcacggcgtttgtcaaaaa
tgttatggtagagacttttctaagaacaaacctgttaacattggcgaggctgtaggaata
attgctgctcagtccataggtcaaccgggtactcaattaactatgagaacttttcatatt
ggtggagttgctcaggctggtagtgaggatgataaaatatctttaaagaatgcctttata
cttaatggcatagaaggttttaatgttagggttgacaatggaattcttttcacaagaaaa
ggaactttaaaaataattaatgttttttatgaggaaaaaattaagaatataaaagagatt
aaagttttagattctcaaagagtaatcaaaggaattcctttgtttgttgataataagggt
gtagagattctctcttcttatattggttatgttaaattaagagacgataattttttcata
gtatcagaagagcaagaagttgctttgaaagctggtacaaggcttgaaatagaggttggt
gattatgttgaatcgggcaaagttattggtacatttgatccatttgcagagcccattatt
gcagaggttaagggtaaaattaaatttaaggatattattttaggaaccactcttaaagag
gagataaatactgaaacaggcaatgttgaaaaaagaattacagataatgtttttgaatct
cttgatcctagaatttttattattgatagtagtggcatggaggttgcatcttatgtatta
ccaggtgatgcgtatcttcaagttgaagatggtcagaatattaatataggagatattatt
gctaaactctctaaaggctctgaaaaaactcaagatattacagggggattgcctcgtgtt
aatgatctttttgaaacaagaattcctaagaatttaactgaaatggccaaagtaagtgga
attgtgcaatttaaatcaattcaaaaaggtaaaaggcttattaatattttagatgagtat
ggagttgagcataaacattatattccagccggcaaacatcttttggttagagatggagat
attgttaaagcaggagacatgctttgtgatggtagaattaatcctcatgatgtgcttgaa
attttaggtgggattagtttgcaagaatttctgttggcagaaattcaggatgtttatcga
aaacaaggtgttagcattaatgacaaacatattggtgtgataattaagcaaatgatgaaa
aaggttaagattgtagcagttggcgatactaattttgtttatgggcaaaaggtagataag
cacactttttatgagcaaaatagaaaagtaatcgaacaaggtggtgaaccagcaatagca
agtccaattcttataggagtaactaagacttctcttaatatagattcttttatttctgca
gcttctttccaggaaacaacaaaagtattaacagatgcttctattgctggaaaaatagat
gatcttaggggattgaaagaaaatgttgtaattgggcatttaattcctactggaactggt
atggggctttataaaaaaattaaagttagcgaaaatatagattctgaagtttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (20)   

Download RDF
DBGET integrated database retrieval system