KEGG T01219: BMD

Bacillus megaterium DSM 319: BMD_3656

Entry

BMD_3656 CDS T01219

Gene name

mdh

Definition

malate dehydrogenase (EC:1.1.1.37)

Orthology

K00024

malate dehydrogenase [EC:1.1.1.37]

Organism

bmd Bacillus megaterium DSM 319

Pathway

bmd00020	Citrate cycle (TCA cycle)
bmd00620	Pyruvate metabolism
bmd00630	Glyoxylate and dicarboxylate metabolism
bmd00680	Methane metabolism
bmd01100	Metabolic pathways
bmd01110	Biosynthesis of secondary metabolites
bmd01120	Microbial metabolism in diverse environments

Module

bmd_M00012	Glyoxylate cycle
bmd_M00168	CAM (Crassulacean acid metabolism), dark

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:bmd00020]
Metabolism; Carbohydrate metabolism; Pyruvate metabolism [PATH:bmd00620]
Metabolism; Carbohydrate metabolism; Glyoxylate and dicarboxylate metabolism [PATH:bmd00630]
Metabolism; Energy metabolism; Methane metabolism [PATH:bmd00680]

SSDB

Motif

Pfam:

Ldh_1_N Ldh_1_C UDPG_MGDP_dh_N Glyco_hydro_4 3HCDH_N DAO FAD_binding_2 ThiF Pyr_redox_2 NAD_binding_8 Shikimate_DH ApbA F420_oxidored Pyr_redox

Other DBs

NCBI-GI:

295705764

NCBI-GeneID:

9119047

UniProt:

D5DKA1

Position

complement(3536796..3537752)

AA seq 318 aa
MAFRRKKIAVIGAGFTGATAALMMAQKELGDVVLVDIPSQTNPTKGKALDMLEASPVQGF
DANIKGTSSYEDIQDADLVLITAGLPRKPGMSRDDLVSTNAKIMKEVSENVKKHAPNSYI
IVLSNPVDAMTYVCYKTTGFPKNRVIGQSGVLDTARFNTFVAQELNISVEDVSGFVLGGH
GDDMVPLVRYSYAGGIPLDKIISPERIEAIVERTRKGGGEIVNLLGNGSAYYAPAASMVQ
MAEAILKDKKRILPSVAYLEGEYGCNNLYLGVPTILGGDGIEHIIELPLTEKENEGLKRS
IESVQSVMAILESSEAFS

NT seq 957 nt +upstreamnt +downstreamnt
atggcatttaggcgtaaaaaaatagctgtaattggtgcgggatttacaggagccacagcc
gcactaatgatggcgcaaaaagaacttggagacgtagtattagttgatattccttcccag
actaacccgactaaaggaaaagcacttgatatgttagaggcaagcccagtccaagggttt
gacgctaatatcaagggaacatctagctatgaagacattcaggatgcagatttagtatta
attactgcaggacttccaagaaaaccgggaatgagccgtgatgacctagtctccacaaac
gcaaaaattatgaaagaagtatcggaaaatgtaaaaaagcatgcaccaaacagttatatt
attgtattgagtaatccagttgatgcaatgacatacgtttgttataaaactacggggttc
cctaagaatagagtaataggccaatctggtgtattagatacagcccgctttaatacattt
gtggctcaagaattaaatatctctgttgaagatgtatcaggatttgttttgggtggccac
ggagatgatatggtgccattagttcgttattcgtatgctggaggaattccacttgataaa
atcatttcacctgaacgtatagaagctattgtagagcgaacgcgcaaaggtggaggagaa
atcgttaacctgcttggaaatggaagcgcctattatgctcctgctgcttctatggttcaa
atggcagaagcgattctaaaggataagaagcgaattctcccttccgtagcttatctagaa
ggtgaatatggctgtaataatctttacctaggtgtaccaacaatcctagggggagacgga
attgaacatatcattgaacttcctttaacggaaaaggaaaatgaagggttaaaacgttca
atcgaatccgtacaaagcgttatggctattttagagtcatcagaagcattcagctaa

All links

Pathway (9)   
   KEGG PATHWAY (7)   
   KEGG MODULE (2)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (14)   
   Pfam (14)   
All databases (37)   

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