KEGG   Priestia megaterium DSM 319: BMD_5069
Entry
BMD_5069          CDS       T01219                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC, B subunit
  KO
K03702  excinuclease ABC subunit B
Organism
bmd  Priestia megaterium DSM 319
Pathway
bmd03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bmd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BMD_5069 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bmd03400]
    BMD_5069 (uvrB)
DNA repair and recombination proteins [BR:bmd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BMD_5069 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      BMD_5069 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_30 Kinesin Microtub_bd SWI2_SNF2 AAA_7 AAA AAA_22 PIF1 TrwB_AAD_bind T2SSE AAA_19 AAA_5 AAA_16 HEM4 DUF87 P-loop_SecA FtsZ_C COG5_N SLFN-g3_helicase AAA_25 HerA_C
Other DBs
NCBI-ProteinID: ADF41868
UniProt: D5DNE1
Position
complement(4880481..4882460)
AA seq 659 aa
MKDQFELVSPYQPQGDQPKAIEKIVKGIKEGKQHQVLLGATGTGKTFTMSNVIKEINKPT
LIMAHNKTLAGQLYSEFKEFFPNNAVEYFVSYYDYYQPEAYVPQTDTFIEKDASINDEID
KLRHSATSSLFERKDVIIIASVSCIYGLGSPEEYKEMVVSLRVGMEKERNQLLRTLVDVQ
YERNDIDFKRGTFRVRGDVVEIFPVSRDEHCIRVEFFGDEIDRIREVDALTGEIIGDREH
VAIFPASHFVTREEKMRVAIQNIEKELEEQLEKLKEAGKLLEAQRLEQRTRYDLEMMREM
GFCSGIENYSRHLTLRPAGSTPYTLLDFFPEDFLLVVDESHVTIPQVRGMYNGDQARKQV
LVDHGFRLPSALDNRPLKFDEFEQHINQIVHVSATPGPYELEKAPDVIEQIIRPTGLLDP
NIEVRPIEGQIDDLIGEIHDRIKRNERVLVTTLTKKMSEDLTNYLKEIGIKVQYLHSEVK
TLERIEIIRELRLGKYDVLVGINLLREGLDIPEVSLVTILDADKEGFLRSERSLIQTIGR
AARNANGHVIMYADRITNSMDIAINETKRRRSIQEAYNEEHGITPTTIQKEVRGSIRATV
VAEDTETYEEAPAFDKLNKKEKAKLVEEMEQEMKEAAKALNFERAAELRDLILELKAEG
NT seq 1980 nt   +upstreamnt  +downstreamnt
ttgaaagatcagtttgaattagtatccccatatcaaccgcaaggtgatcagccaaaggca
attgaaaagattgtgaaaggaattaaagaaggtaagcagcatcaagttttattaggtgct
acaggaacgggaaaaaccttcaccatgtctaatgttattaaggaaataaataagccgaca
ttaattatggctcataacaaaacgcttgctggtcaattatacagtgagtttaaagagttt
tttcctaataatgcagtcgaatactttgtcagttactatgattactatcagcctgaagcc
tatgtacctcaaacagatacatttattgaaaaagatgcaagcattaatgatgaaattgat
aaacttcgtcactcggcaacttcttctctttttgaacgaaaagatgtcattattattgcc
agcgtatcctgtatttatggcttagggtctccggaagaatacaaagaaatggtcgtatct
cttcgagtaggaatggagaaagagcgtaatcagctgcttcgtacgctagtagatgtacag
tacgaaagaaatgatattgactttaaacgcggaacgtttcgcgttcgcggtgatgttgtg
gagattttccctgtgtctcgagatgaacactgtattcgcgtcgagtttttcggcgatgaa
attgaccgcattcgagaagttgacgctctaacaggagaaatcattggtgatcgtgaacat
gtagctatcttcccggcatctcactttgtcacgagagaagaaaaaatgcgtgttgccatt
caaaatattgaaaaagaactagaagaacagctagagaagctaaaagaagcaggcaagctt
ttagaagcgcagcgcttggagcagcgcacgcgctacgacctagaaatgatgagagaaatg
ggcttttgttcgggaatcgagaactactctcgtcatttaacgcttcgtcccgctggttct
acaccttatacactgctggacttcttccctgaagatttccttcttgttgtggatgaatca
cacgttacgattcctcaagttagaggaatgtataatggagaccaagcacgtaaacaagtg
ttagtagaccatggtttccgcttgccgtccgcattagataaccgcccgcttaaatttgat
gaatttgaacagcatattaaccaaattgttcatgtttctgcaacaccaggtccttacgaa
cttgagaaggcacctgatgtgattgaacaaattatccgtccaacgggattattggatcca
aatattgaagttcgaccaattgaaggacagattgatgatttaattggagaaattcacgac
cggattaagcgaaatgaacgagtgctcgttacgacgttaacaaagaaaatgtctgaggat
ttaacgaactacttaaaagaaattggcattaaagttcaatatcttcactctgaggtgaag
acgctcgagcgtattgaaattatccgagagctgcggcttggaaaatatgatgtgcttgta
ggaattaacttacttcgtgaaggtttagatattccggaggtttcgttagtaaccatatta
gatgccgacaaagaaggattcttgcgttcagaacgatcgcttattcaaaccatcggacgt
gctgcgcgaaatgctaatggacatgtcattatgtatgcagatcgcatcacaaactccatg
gacattgctatcaatgagaccaagcgtcgtagaagtattcaagaagcttacaatgaagag
catggtattacgccgacaacgattcaaaaagaagttcgaggctcaattcgtgcaacagta
gtagcagaagatacagaaacgtatgaagaagcaccggcatttgataagctcaacaaaaaa
gaaaaagcaaagctcgtagaagaaatggaacaagaaatgaaagaagcagccaaagcgctt
aactttgaacgcgcagctgagcttcgtgacttgattctagaattaaaagcggaagggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (27)   
   Pfam (27)   
All databases (35)   

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