KEGG   Burkholderia metallica: WJ16_00560
Entry
WJ16_00560        CDS       T04871                                 
Symbol
putA
Name
(GenBank) transcriptional regulator
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
bmec  Burkholderia metallica
Pathway
bmec00250  Alanine, aspartate and glutamate metabolism
bmec00330  Arginine and proline metabolism
bmec01100  Metabolic pathways
bmec01110  Biosynthesis of secondary metabolites
Module
bmec_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:bmec00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    WJ16_00560 (putA)
   00330 Arginine and proline metabolism
    WJ16_00560 (putA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:bmec03000]
    WJ16_00560 (putA)
Enzymes [BR:bmec01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     WJ16_00560 (putA)
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     WJ16_00560 (putA)
Transcription factors [BR:bmec03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    WJ16_00560 (putA)
SSDB
Motif
Pfam: Aldedh Pro_dh Pro_dh-DNA_bdg PRODH PutA_1st RHH_1
Other DBs
NCBI-ProteinID: AOJ30113
Position
1:129757..133689
AA seq 1310 aa
MASTTLGVKVDDLLRSRLKDAAARLERTPHWLIKQAIFAYLERIEHGQLPPELSGHSGVT
ELADGQAADGDDDNSPHPFLEFAQNVQPQSVLRAAITAAYRRPEPECVPFLLGQARLPAN
LQADVQALATKLVEALREKSSGGGVEGLIHEFSLSSQEGVALMCLAEALLRIPDRATRDA
LIRDKISKGDWRSHVGHAPSLFVNAATWGLMITGKLVTTNSEAGLSSALTRLIGRGGEPL
IRKGVDMAMRLMGEQFVTGETISEALANSRKYEARGFRYSYDMLGEAATTEEDAQRYYAS
YEQAIHAIGKAAGGRGIYEGPGISIKLSALHARYSRSQQDRTMSELLPRVRALALLARRY
DIGLNIDAEEADRLELSLDLLEALCFDPDLAGWNGIGFVVQGYQKRCPFVIDYLIDLARR
SRHRLMIRLVKGAYWDTEIKRAQVDGLEGYPVYTRKIYTDVSYLACAKKLLAAPDAVYPQ
FATHNAYTLAAIYHLAGQNYYPGQYEFQCLHGMGEPLYEEVTGRDKLNRPCRVYAPVGTH
ETLLAYLVRRLLENGANTSFVNRIADKTVSVKELVADPVDEASKVVPLGAPHAKIPLPRN
LYGDERPNSMGLDLSNEHRLASLSSALLASAHFPWRAAPMLADDTLADAPARDVRNPADQ
RDLVGTVSEATAEHVSAALAHAVAAAPIWQATPVDARADCLVRAADLLEAQMHTLMGLIV
REAGKSLPNAIAEIREAVDFLRYYAAQIRDEFSNDTHRPLGPVVCISPWNFPLAIFMGQV
AAALAAGNTVLAKPAEQTPLIAAQAVRLLREAGVPAGAVQLLPGTGETVGAALVADPRTR
AVMFTGSTEVARLINKTLAARLDPDGKPIPLIAETGGQNAMIVDSSALAEQVVADVMQSS
FDSAGQRCSALRVLCLQDDVADRTLTMLKGAMHELALGNPDRLSTDVGPVIDGEAKQTID
AHVAAMKDKGHAVTQLPMPDACAHGTFVPPTLIEIGSIDELKREVFGPVLHVVRYRRSQL
DKLLEQIRATGYGLTLGIHTRIDETIAHVISNAHVGNIYVNRNVIGAVVGVQPFGGEGLS
GTGPKAGGALYLQRLLATRPSGLPRSLAQMLIADGAVEGDARGNPAAALTTLRDWLIEQR
EPALAARCDGYLAQVPAGATAVLTGPTGERNTYTLGPRGTVLCVAATPGGARAQFAAVLA
TGNRALFAGAAGEALVAALPASLKAHAAVRKQADAPFDAVLFEGDSDELQTLVKDVAQRP
GPIVSVQGVSVGAFENGDAEDYALERLLTERSVSVNTAAAGGNANLMTIG
NT seq 3933 nt   +upstreamnt  +downstreamnt
atggcaagcacgactctcggcgtcaaagtcgacgaccttctccgctcgcgcctcaaggac
gccgccgcgcgtctcgagcgcaccccccactggctgatcaagcaggcgatcttcgcgtat
ctcgagcggatcgagcacggccagctgccgcccgagctgtcggggcacagcggcgtgacg
gagcttgccgacggtcaggcggcggacggcgacgacgacaactcgccgcatccgttcctc
gagttcgcgcagaacgtgcagccgcaatcggtgctgcgcgcggcgatcacggccgcgtac
cgccggcccgagccggaatgcgtgccgttcctgctcggccaggcgcgtctgcccgcgaac
ctgcaggcggacgtgcaggcgctcgcgacgaagctcgtcgaggcgctgcgcgagaaaagc
tcgggcggcggcgtcgaagggctgatccacgagttctcgctgtcgagccaggaaggcgtc
gcgctgatgtgtctcgccgaagcgctgctgcgcattccggaccgggcgacgcgcgatgcg
ctgatccgcgacaagatcagcaagggcgactggcgctcgcacgtcggccacgcgccgtcg
ctgttcgtgaacgcggcgacctgggggctgatgatcaccggcaagctcgtgacgaccaac
agcgaagccgggctgtcgtcggcgctcacgcgcctgatcggccgcggcggcgagccgctg
atccgcaagggcgtcgacatggcgatgcgcctgatgggcgagcagttcgtcaccggcgag
acgatttccgaagcgctcgcgaacagccgcaagtacgaagcgcgcggctttcgctactcg
tacgacatgctcggcgaagcggcgacgaccgaagaggacgcgcagcgctattacgcgtcg
tacgaacaggcgatccacgcgatcggcaaggcggccggcggccgcggcatctacgaaggc
ccgggcatctcgatcaagctgtcggcgctgcatgcgcgctactcgcgctcgcagcaggac
cgcacgatgagcgagctgctgccgcgcgtgcgcgcactcgcgctgctcgctcgccgctac
gacatcggcctgaacatcgacgcggaagaagccgaccggctcgagctgtcgctcgatctg
ctcgaggcgctgtgcttcgacccggatctcgcgggctggaacggcatcggcttcgtcgtg
cagggctaccagaagcgctgcccgttcgtgatcgactacctgatcgatctcgcgcgccgc
agccgtcaccgcctgatgatccggctcgtgaagggcgcgtactgggataccgagatcaag
cgcgcgcaggtcgacggcctcgaaggctatccggtctacacgcgcaagatctacaccgac
gtgtcgtacctcgcatgcgcgaagaagctgctcgcggcgccggatgccgtgtatccgcag
ttcgcgacgcacaacgcgtacacgctggccgcgatctaccatctcgcgggccagaactac
tacccgggccagtacgaattccagtgcctgcacgggatgggcgagccgctgtacgaggaa
gtcaccggccgcgacaagctgaaccgtccgtgccgcgtgtacgcgccggtcggcacgcac
gagacgctgctcgcgtacctggtgcgccgcctgctcgagaacggcgcgaacacgtcgttc
gtgaaccgcatcgcggataaaaccgtgtcggtgaaggaactggtcgccgatccggtcgac
gaagcgtcgaaggtcgtgccgctcggcgcgccgcacgcgaagatcccgctgccgcgcaac
ctgtacggcgacgagcgtcccaactcgatgggcctcgatctgtcgaacgaacaccgtctc
gcgtcgctgtcgtccgcgctgctcgcgagcgcgcatttcccgtggcgcgcggcgccgatg
ctcgccgacgacacgctcgccgacgcaccggcccgcgacgtgcgcaatccggccgaccag
cgcgacctggtcggcacggtcagcgaagcgacggccgaacacgtgagcgcggcgctcgcg
cacgcggtggccgccgcgccgatctggcaggcgacgccggtcgacgcgcgcgccgattgc
ctggtgcgcgcggccgacctgctcgaagcgcagatgcacacgctgatgggcctgatcgtg
cgcgaagccggcaagtcgctgccgaacgcgatcgcggagatccgcgaagcggtcgacttc
ctgcgctactacgccgcgcagatccgcgacgaattctcgaacgacacgcaccgtccgctg
ggcccggtcgtctgtatcagcccgtggaacttcccgctcgcgatcttcatgggccaggtc
gccgcggcgctcgccgccggcaacacggtgctcgcgaaaccggccgaacagacgccgctg
atcgccgcgcaggccgtgcgcctgctgcgcgaggccggtgtgccggccggcgcggtgcag
ctgctgccgggcacgggcgagaccgtcggcgcggcgctggtagccgatccgcgtacgcgc
gcggtgatgttcaccggctcgaccgaagtcgcgcgcctgatcaacaagacgctcgccgcg
cgcctcgacccggacggcaagccaatcccgctgatcgccgaaacgggcggccagaacgcg
atgatcgtcgactcgtcggcgctcgcggagcaggtcgtcgcggacgtgatgcagtcgtcg
ttcgactcggccggtcaacggtgctcggcgctgcgcgttctgtgtctgcaggacgacgtt
gcggaccgcacgctgacgatgctcaagggcgcgatgcacgagctggcgctcggcaacccg
gaccggctgtcgacggacgtcggcccggtgatcgacggtgaagcgaagcagacgatcgac
gcgcacgtcgcggcgatgaaggacaagggccacgcggtcacgcaactgccgatgcccgat
gcatgcgcgcacggcacgttcgtgccgccgacgctgatcgagatcggcagcatcgacgag
ttgaagcgcgaagtgttcggccccgtgctgcacgtggtgcgctatcgccgcagccagctc
gacaagctgctcgaacagatccgcgcgaccggttacgggctgacgctgggcatccacacg
cggatcgacgagacgatcgcgcacgtgatctcgaacgcgcacgtcggcaacatctacgtg
aaccgcaacgtgatcggcgcggtggtcggcgtgcagccgttcggcggcgaagggctgtcg
ggcaccggcccgaaggccggcggcgcgctgtacctgcagcgcctgctcgcgacgcgtccg
tcgggcctgccgcgctcgctcgcgcagatgctgatcgcggacggcgcggtcgaaggcgat
gcacgcggcaacccggcggcagcgctcacgacgctgcgcgactggctgatcgagcagcgc
gaaccggcgctggccgcacggtgcgacggctatctcgcgcaggtgccggccggcgcgact
gccgtgctgaccgggccgacgggcgagcgaaacacgtatacactcggcccgcgcggcacg
gtgctgtgtgtcgcggcgacgccgggcggcgcgcgtgcgcagttcgccgcggtgctggcc
accggcaaccgcgcgctgttcgccggtgctgccggcgaggcgctggtcgccgcgctgccc
gcgtcgctgaaggcgcacgcggcggtgcgcaagcaggccgacgcgccgttcgacgcggtg
ctgttcgaaggcgacagcgacgaactgcagacgctcgtgaaggacgtcgcgcagcggccg
ggcccgatcgtatcggtgcagggcgtatcggtgggcgcgttcgagaacggcgatgcggaa
gattacgcgctggaacggctgctgacggagcgctcggtgagcgtgaatacggcggcggcc
ggcggcaatgcaaatttgatgacgatcggctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (15)   
   KEGG COMPOUND (15)   
Chemical reaction (10)   
   KEGG ENZYME (2)   
   KEGG REACTION (8)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (43)   

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