KEGG   Brucella abortus 2308: BAB1_2004
Entry
BAB1_2004         CDS       T00304                                 
Name
(GenBank) AP endonuclease, family 1:Exodeoxyribonuclease III xth:Endonuclease/exonuclease/phosphatase family
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
bmf  Brucella abortus 2308
Pathway
bmf03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:bmf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BAB1_2004
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bmf03400]
    BAB1_2004
Enzymes [BR:bmf01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     BAB1_2004
DNA repair and recombination proteins [BR:bmf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     BAB1_2004
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-ProteinID: CAJ11960
UniProt: Q2YR65
Position
I:1940844..1941650
AA seq 268 aa
MAFSIATWNINSVRLRMPLVEQFLRDYQPDVLCLQETKCPDDLFPAKGFRALGYEHIAIS
GQKGYHGVATVSRRPLDGVEKVDFCNMGDCRHLSAVVEAGDRKLRIHNFYVPAGGDEPDP
EINPKFAHKLAFLEEMRAIIADRKDGCSSLLVGDLNIAPLENDVWSHKQLLKIVSHTPIE
TETLEDLRIKGGWSDLMRHLIAADQKIYTWWSYRAKDWDAADRGRRLDHVWGSADLESHN
KGLQVLRDARGWDRPSDHVPVIATFDLD
NT seq 807 nt   +upstreamnt  +downstreamnt
atggccttttccattgctacctggaacatcaattcggtgcgtctgcgcatgccgcttgtc
gagcagtttctgcgcgattatcagcccgatgttctgtgtttgcaggaaaccaagtgcccc
gacgacctgtttcccgccaagggttttcgtgcgctcggctatgagcatatcgcgatcagc
ggccagaaaggttatcacggggtcgccacggtttcacgccgcccgctggacggtgtggag
aaggtagacttctgcaatatgggcgattgccgccacctgagcgccgtcgttgaggcgggc
gacaggaaactgcgcatccataatttctatgtaccggcgggcggcgacgagccggacccg
gaaatcaacccgaaatttgcgcacaagctggcatttcttgaggaaatgcgcgccattatt
gccgaccggaaggacggatgttcatcgcttctcgtcggcgatctcaacatcgcgccgctc
gaaaatgacgtctggtcgcacaagcagcttttgaagatcgtcagccatacgccgatcgag
accgaaacgctggaagacctgcggatcaagggcggctggagcgacctcatgcgccatctc
attgcggcggaccagaaaatctatacctggtggagctatcgcgccaaggattgggatgcc
gccgatcgcggccgcaggctggaccatgtatggggttcggctgatctggaaagccataac
aagggcttgcaggtgctgcgcgatgcgcgcggctgggaccgcccttcggatcatgtgccg
gtgattgcgactttcgatctggattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system