KEGG   Borrelia miyamotoi CT14D4: RJ61_04145
Entry
RJ61_04145        CDS       T03577                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
bmiy  Borrelia miyamotoi CT14D4
Pathway
bmiy03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bmiy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    RJ61_04145
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bmiy03400]
    RJ61_04145
DNA repair and recombination proteins [BR:bmiy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     RJ61_04145
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      RJ61_04145
SSDB
Motif
Pfam: Helicase_C UvrB_inter UvrB ResIII UVR DEAD Viral_helicase1 AAA_30 P-loop_SecA
Other DBs
NCBI-ProteinID: AJA58919
Position
893086..895050
AA seq 654 aa
MRFCLKFDYYPAGDQPKAIQEIKQSILLNNKYQTLKGVTGSGKTFTIANIIRDLERPSLI
ISHNKTLAAQLYREFKDFFPNNAVEYFVSYYDYYQPESYVPSKDLYVEKEATINEEIEIK
RIRTITSLSRRRDVIVIATVSSIYALGSPKLFKNAAQFFFVGQKISIKEIADIFVKLQYS
RTLVNIEHNKFSIKGDVIEVWPSNEHGDFAYRICLDFDEIVRITRISPLTKKVLGSTDEF
TLFAKSYFVIPYENVLDSLPKIYADLEIQCHYFKENGKLVEAERLKQRVEYDIEMLRETG
SCQGIENYYKYFDKSEMGRPYCLFDFFPRDYLLFIDESHVTLPQFRGMYNGDYSRKLNLV
NFGFRLPSALENRPLKYNEFESLINQAVFISATPGLEEYEKSNIIVEQIIRPTGLVDPEI
VLRMSDGQMEDIYREIQKRIALNEKVLITTLTKKMAEDLTDYLLSLGIKARYLHAELNAI
ERVDIITSLRRSEINVIVGINLLREGLDIPEVSLVIILDADKVGFLRSTTSLIQMIGRAA
RNSNGCVIMYYDQVSCAMQEAINETNRRRNIQIEYNKKNNVIPRTVIKRVQNILEKELKR
ETVDYNSEKVISDKKLSQKDLIIKLKFKLDEAVSDERFEDAIFLRDKIREILKG
NT seq 1965 nt   +upstreamnt  +downstreamnt
atgcgattttgtttaaagtttgattattatcctgctggtgatcaaccaaaagcaattcaa
gaaattaagcaatctattttacttaataataaatatcaaactttaaagggtgttacaggt
agtggtaaaacttttacaatagctaatattattagagatttggagcgtccttctttgata
attagtcataataaaacattagcagcacagctttatagggaatttaaagatttttttcca
aataatgcagttgaatattttgtttcttattatgattattatcaacctgagtcttatgtc
ccttcaaaagatttgtatgtagaaaaagaagctactattaatgaggaaattgagataaag
aggataaggacgataacatctctttccagaaggcgagatgttattgttattgctacggtt
tcttcaatttatgcgttaggctctccaaaactttttaagaatgcggctcagttttttttt
gtaggacaaaaaatttctattaaggagatagcagatatttttgttaagcttcagtattca
agaacacttgtgaatattgaacataataagttttctattaagggtgatgttattgaggta
tggcctagtaatgaacatggtgattttgcatatagaatttgtttggattttgatgagatt
gttaggataactaggattagtccacttacaaaaaaggttttaggctctactgatgaattc
actctatttgctaaatcttattttgttattccttatgaaaatgtattggattctcttcct
aaaatatatgctgatttagaaatacaatgccattattttaaggaaaatggtaagcttgtt
gaggccgaaagacttaaacagagagtagagtatgatattgagatgttaagagagactggg
tcatgtcagggtatagaaaattattataaatattttgataagagtgaaatgggtagacct
tattgtctttttgatttttttcctagggattatttgctctttattgatgagtctcatgtt
actttacctcagtttagaggaatgtataatggagattattcaagaaaattgaatcttgtt
aattttggatttagacttccatcggcacttgagaatagaccccttaaatataatgagttt
gagtctttaattaatcaggctgtctttatttcagcaactcctggtcttgaagaatatgaa
aagagtaatattattgttgagcaaataatacgtcccacaggtcttgttgatccagaaatt
gtgcttagaatgtcggacggacagatggaagatatttatagagaaattcagaaaagaata
gctttaaatgaaaaagttttaattacaactttgactaaaaaaatggctgaggatttaaca
gattatttgttgagtcttggcataaaggctagatatctgcatgcagagctcaatgcaatt
gagagagtagatattattacatctcttagaagatcagaaattaatgttattgtggggatt
aacttgttaagagaaggtttagatattcctgaagtttctcttgttattatattagatgct
gataaagtaggctttttaagatctactacttctttgattcaaatgattggtagggctgct
agaaactcaaatggttgtgttataatgtactatgatcaagtaagttgtgcaatgcaagaa
gccattaacgaaactaatagaagacgtaatattcaaattgagtacaataaaaaaaataat
gttattccaagaacggttattaaaagagtacaaaatattttagagaaagaattaaaacgt
gaaacagttgattataatagtgaaaaagttatttctgataaaaaattgtctcaaaaagat
cttattattaagcttaaatttaaacttgatgaggcagttagtgatgaaaggtttgaggat
gctatctttctacgagataaaataagagagattcttaaaggataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system