KEGG   Burkholderia multivorans ATCC 17616 (Tohoku): BMULJ_01995
Entry
BMULJ_01995       CDS       T00740                                 
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
bmj  Burkholderia multivorans ATCC 17616 (Tohoku)
Pathway
bmj03030  DNA replication
bmj03410  Base excision repair
bmj03420  Nucleotide excision repair
bmj03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bmj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BMULJ_01995 (ligA)
   03410 Base excision repair
    BMULJ_01995 (ligA)
   03420 Nucleotide excision repair
    BMULJ_01995 (ligA)
   03430 Mismatch repair
    BMULJ_01995 (ligA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bmj03032]
    BMULJ_01995 (ligA)
   03400 DNA repair and recombination proteins [BR:bmj03400]
    BMULJ_01995 (ligA)
Enzymes [BR:bmj01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     BMULJ_01995 (ligA)
DNA replication proteins [BR:bmj03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     BMULJ_01995 (ligA)
DNA repair and recombination proteins [BR:bmj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     BMULJ_01995 (ligA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BMULJ_01995 (ligA)
   MMR (mismatch excision repair)
    DNA ligase
     BMULJ_01995 (ligA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      BMULJ_01995 (ligA)
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 DNA_ligase_ZBD HHH PTCB-BRCT MctB BRCT_2 5_3_exonuc
Other DBs
NCBI-ProteinID: BAG43912
UniProt: A9AIK9
Position
1:complement(2144450..2146525)
AA seq 691 aa
MARTQAEPPASQPDVRAAWLRDQLERANYAYYVLDQPDLPDAEYDRLFRELQQLESDHPD
LVTPDSPTQRVGGAVASGFTPVVHDAPMLSLNNGFADDDIVAFDKRVADALGKTTDLAGS
VTDPVEYACELKFDGLAISLRYEHGVFVQASTRGDGTTGEDVTENVRTIRSIPLKLKGDR
VPAVLDVRGEVLMFKRDFARLNERQRAAEQREFANPRNAAAGSLRQLDPKITAQRPLSFF
AYGIGVLDGMPMPDTHSALLDWYEALGLPVNRERAVVYGAQGLLDFFRKVGEKRESLPYD
IDGVVYKVNRRDEQDRLGFVSRAPRFALAHKFPAQEALTKLVAIGVQVGRTGAITPVARL
EPVFVGGATVTNATLHNEDEVRRKDIRIGDTVIVRRAGDVIPEVVGAVLDRRPADAAEFV
MPTECPVCGSKIERLPDEAIARCTGGLFCPAQRKQALWHFAQRRALDIDGLGEKIIDQLV
ELNLVRTPADLFNLGFATLAELDRFAEKSAQNLLDSLEKAKHTTLARFIYALGIRHVGES
TAKDLAKHFGSLDPIMNATIDELLEVNDVGPIVAESIHQFFAEEHNRTVIEQLRAPGKVT
WPEGPPAPKAPQGVLAGKTVVLTGTLPNLTRDDAKEMLEAAGAKVAGSVSKKTDYVIAGA
EAGSKLAKAEALGIPVLDEDGLHQLLEGNTR
NT seq 2076 nt   +upstreamnt  +downstreamnt
atggcccgaacccaagccgaaccgccagccagtcaacccgatgtgcgcgccgcctggctg
cgcgaccagctcgaacgcgcgaactacgcgtactacgtgctcgatcagcccgatctgccc
gatgcggaatacgatcggctgttccgcgagctgcagcagctcgaatccgatcatcccgat
ctcgtcacgcccgattcgccgacgcagcgcgtcggcggcgccgtcgcgagcggcttcacg
ccggtcgttcacgatgcgccgatgctgtcgctgaacaacgggttcgccgacgacgacatc
gtcgcgttcgacaagcgcgtcgccgacgcgctcggcaagacgaccgatctcgccggctcg
gtgacggatcccgtcgaatacgcgtgcgagctgaagttcgacgggctcgcgatttcgctg
cgctacgagcacggcgtgttcgtgcaggcgtcgacgcgcggcgatggcacgaccggcgag
gacgtgaccgaaaacgtccgcacgatccgctcgattccgctgaagctgaagggcgaccgc
gtgccggccgtgctcgacgtgcgcggcgaggtgctgatgttcaagcgcgattttgcgcgc
ctgaacgaacgccagcgcgcggccgagcagcgcgagttcgcgaacccgcgcaacgcggcg
gccggcagcctgcgccagctcgatccgaagatcaccgcgcagcgtccgctctcgttcttc
gcgtacggcatcggcgtgctcgacgggatgccgatgcccgatacgcacagcgcgctgctc
gactggtacgaggcgctcgggctgccggtgaaccgcgagcgcgcggtcgtgtacggcgcg
caggggctgctcgacttcttccgcaaggtcggcgagaagcgcgagtcgctgccgtacgac
atcgacggcgtcgtgtacaaggtgaaccgccgcgacgagcaggatcgcctcggtttcgtg
tcgcgcgcgccgcgcttcgcgctcgcacacaaattccccgcgcaggaggcgctgacgaag
ctggtcgccatcggcgtgcaggtcggccgcaccggcgcgatcacgccggtcgcgcggctc
gagcccgtgttcgtcggcggcgcgaccgtcacgaacgcgacgctgcacaacgaggacgag
gtgcgccgtaaggacatccggatcggcgatacggtgatcgtgcggcgcgcgggcgacgtg
attccggaggtggtgggcgccgtgctcgaccggcgtccggccgacgcggccgaattcgtg
atgccgaccgaatgcccggtatgcggctcgaagatcgagcggctgcccgacgaggcgatc
gcgcgctgcacgggcgggctgttttgccccgcgcagcgcaagcaggcgctgtggcatttc
gcgcagcggcgcgcgctcgacatcgacgggctcggcgagaagatcatcgaccagctcgtg
gagctgaacctcgtacgcacgccggccgatctgttcaacctcggcttcgcgacgctcgcg
gagctcgaccgcttcgcggagaaatcggcgcagaatctgctcgactcgctcgagaaggcg
aagcacacgacgctcgcgcgcttcatttacgcgctcggcatccgccatgtcggcgaatcg
accgcgaaggatctcgccaagcatttcggctcgctcgacccgatcatgaacgcgacgatc
gacgagctgctcgaagtgaacgacgtcgggccgatcgtcgccgaatcgatccaccagttc
ttcgcggaagagcacaaccggaccgtgatcgagcagctgcgcgcgccgggcaaggtcacc
tggccggaagggccgcccgcgccgaaggcgccgcagggcgtgctcgccggcaagacggtc
gtgctgaccggcacgctgccgaacctcacgcgcgacgacgcgaaggagatgctcgaggcg
gcgggcgcgaaggtggccggctcggtgtcgaagaagaccgattacgtgatcgcgggcgcc
gaagccggcagcaagctcgcgaaggccgaagcgctcggcattccggtgctcgacgaagac
gggctgcatcaactcctggagggcaacacgcgatga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (11)   
   Pfam (11)   
All databases (32)   

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