KEGG   Bombyx mori (domestic silkworm): 100134916
Entry
100134916         CDS       T02817                                 
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
  KO
K11367  chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
bmor  Bombyx mori (domestic silkworm)
Brite
KEGG Orthology (KO) [BR:bmor00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bmor03021]
    100134916 (CHD1)
   03036 Chromosome and associated proteins [BR:bmor03036]
    100134916 (CHD1)
Transcription machinery [BR:bmor03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     100134916 (CHD1)
Chromosome and associated proteins [BR:bmor03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    SAGA complex
     100134916 (CHD1)
    SLIK complex
     100134916 (CHD1)
SSDB
Motif
Pfam: SNF2-rel_dom CDH1_2_SANT_HL1 Helicase_C CHD1-like_C Chromo HDA2-3 ResIII DEAD
Other DBs
NCBI-GeneID: 100134916
NCBI-ProteinID: NP_001106734
UniProt: A9X4T1
Position
5:10964741..10978010
AA seq 1365 aa
MRRGKKGVTGNVTTIYYIEEHGDPNEGCDPNDEDSTEPQYLIKWKGWSHIHNTWESEKTI
NDQKVKGLKKLENFIKKEVEISWWRQQAGPEDIDYYECQSELQQELVKTYNNVERIIAEQ
NRELEGGGTAHEYFCKWESLPYADATWEDAVLIEKRWPVEVEHFKSREAAKSTPSRHCPV
LKRRPKFHQIKEQPEYVGKDSSYHLRDYQMDGLNWLIHSWCKDNSVILADEMGLGKTIQT
ICFLYYLFKSQHLYGPFLCVVPLSTMTAWQREFQQWAPDINVVTYIGDVSSRDIIRQFEW
SFSSSKRLKFNAILTTYEILLKDRQFLRSFSWACLLVDEAHRLKNDDSLLYKALKEFDTN
HRLLVTGTPLQNSLKELWALLHFIMPYKFESWEDFEKDHEDAATKGYEKLHKQLEPFILR
RQKKDVEKSLPAKVEQILRVEMTSIQKQYYKWILTKNYSALRKGVKGSINTFINIVIELK
KCCNHALLTKPEDFESRASLATSDAVEKLLRGSGKLLLLDKLLCRLKETGHRVLIFSQMV
RMLDILAEYLQRRHFPFQRLDGSIKGELRKQALDHFNAEGSQDFCFLLSTRAGGLGINLA
TADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEDIVERAKRKMVLDH
LVIQRMDTTGKTVLNKRDASGTTANNPFNKEDLNAILKFGAEELFKDDEENDEDPVCDID
EILQRAETRDEGPAMVGDELLSAFKVASFTFDEEKAVNELKKDNADEEPKDWDDIIPENV
RKTIAEAEKLKEMEDIYLPPRRKNQLQNNADGGRRRRGRSGDGGDGDGVDGDGEAESDAS
DGEASADDDRPRKRGRPPASHREKIKGFTDQEIRRFVKSYKKFSAPLKHLDSIACDAELQ
EKPLAELKRLGEILQERCKAVLSETAEPSEQNEGRKNNRKTFKLGGVPVNAKTLAACQDE
LAALDDFLPQTKEERLKWQLDFRTRPANFDVEWNVSDDSKLLAGIYQYGLGSWEAIKMDS
SFEIGDKILTNEDKKPQAKHLQSRAEYLLKLIKKLLDQKNGKQKMKKPRPKRANKEPVTK
DIVEDDGSSAEDKKTKGVKNDKTEKGKLKIEEVSTHDETSNDKKEKDKKRKKDEDRKGDK
SKGRKKPRQRGNEGIPGPMHFTANNEPRALEVLGDLDPSVFEECKEKMRPVKKALKALDN
PDQSLSETEQVSRTRACLTQIGTQIDLCVEAYPDSQKVEWRSNLWYFVSKFTNFDAKQLY
KLYKYGLKKNEASKQKDGKHKENVKTNNRNNHNSINHLKSFKKNSNSKQKSDTNDKKEKK
MKLEKEKTDKHDKNQHTSGVKRKLEDGECDPEPNDNKRHERYVVD
NT seq 4098 nt   +upstreamnt  +downstreamnt
atgcgacgagggaaaaaaggagtcactggcaatgtgaccaccatttattatatagaagaa
catggagaccctaatgaaggttgtgaccctaatgatgaagactctactgaacctcaatac
ctgataaagtggaaaggatggtcacatattcacaacacatgggaatctgaaaagacaatt
aatgatcaaaaagttaaaggcttaaagaaactggaaaactttattaagaaagaagtagaa
atctcatggtggagacagcaagctggacctgaggatatagattactatgagtgtcagtct
gaactacagcaagaattagttaaaacctacaataacgttgaaaggataatagctgaacaa
aatcgtgagctagaaggtggtggaactgctcatgaatatttttgcaaatgggaatctctt
ccatatgctgatgcaacatgggaagatgcagttttaatagagaaaagatggcctgttgag
gtggagcactttaaaagtcgtgaagctgctaaaagtactccatctaggcattgccctgta
ttgaaaaggcgacccaagtttcatcagataaaagaacaacctgaatacgtgggaaaagat
tcaagttaccacttgagagattatcaaatggatggattgaattggttaattcactcatgg
tgtaaagacaattcagtaattttagcagatgaaatgggcctaggcaaaacgatacagaca
atttgttttttatactatctcttcaagtcgcaacatctgtatggaccatttctttgtgta
gtgcctctgagtacaatgactgcctggcaaagggaatttcagcagtgggcacccgacatt
aatgttgttacttatattggtgatgttagtagcagagatataattaggcagtttgagtgg
agcttttctagctcaaaaagactgaaatttaacgcaatattaaccacatatgagattttg
ttaaaagacagacagtttttaaggtcttttagttgggcttgcttgcttgtagatgaggct
cataggttaaaaaacgatgactctctactatataaggccttaaaagaatttgataccaat
catagattattagttactggtacacctttacaaaactcactgaaagaattgtgggccctt
ttacattttataatgccttacaagtttgagtcttgggaagactttgaaaaagatcatgaa
gatgctgctaccaaaggatacgaaaaattacacaaacagttagaaccgtttatattaagg
aggcagaaaaaagatgtagaaaaatcattacctgccaaagtggaacaaatattaagggtg
gaaatgacatctatacaaaaacaatactacaaatggatattaacaaaaaactatagtgca
cttagaaaaggcgtaaaaggttcaattaacacatttatcaatattgttattgaactaaaa
aaatgttgcaaccatgcattattgacaaagccagaagatttcgagtctagagcttctctt
gctacttcggatgctgttgagaaacttcttaggggctcaggaaaattacttttgctagat
aaactgctgtgcaggttaaaggagactggtcatagggttttaatcttttctcaaatggtc
cgaatgttagacattttagcagaatatttacaaaggagacattttccttttcaacgtctt
gatggaagcattaaaggtgaattgagaaaacaagcacttgatcattttaacgctgaaggt
tcgcaagacttctgttttttgttgtctactcgtgctggtgggttaggtattaaccttgcc
actgcagatactgtgataatatttgactcagactggaatcctcaaaatgatttgcaagca
caagcacgagcacatcgtattggtcaaaaaaatcaggttaatatttataggttagtgact
gcaaggtctgttgaagaagatattgtagagagagcaaaaagaaaaatggttttagaccac
ctggtaattcaaagaatggatactactggaaaaactgtgctgaacaaacgggatgcttca
gggaccacagccaataatccattcaataaagaagatttaaatgctattttaaaatttggt
gctgaagagctttttaaagatgatgaagaaaatgatgaagacccagtttgtgacattgat
gaaattttgcaaagggctgaaacccgggatgaaggtcctgcaatggtgggtgatgagtta
ctgtcagcttttaaggtggctagttttacttttgatgaagagaaagctgtcaatgaactg
aagaaagataatgctgatgaagaacctaaagactgggatgacatcatccctgaaaatgtt
cggaaaacaatagcagaagcagaaaaattaaaagaaatggaagatatttatttgccacct
cgaagaaaaaatcaactacaaaataatgctgatggtggtagaagacgtcgcggtcgttct
ggtgatggtggcgatggcgatggtgttgatggtgacggtgaggctgaaagcgatgcatct
gatggtgaagccagtgctgatgatgatcgaccgagaaaaagaggtcgtcctcctgcttca
catcgggagaaaatcaaaggcttcacagatcaagagataagacgttttgtgaaaagctat
aagaaattttccgcgccactgaagcatctcgacagtatagcgtgtgatgccgaattacaa
gaaaaaccattagctgagctaaaaagactgggtgaaatactgcaggaaagatgtaaagct
gtacttagtgagacagcagaaccaagtgaacaaaatgaaggccgtaaaaacaacaggaag
acatttaaactcggaggagtacctgtaaatgcgaaaaccctagctgcatgtcaagatgag
ttggcagctttggatgactttctgccacaaactaaagaagaacgtctcaagtggcaacta
gattttaggacgagaccagcgaattttgatgttgagtggaatgtctcggacgattcaaaa
ttactagcaggaatataccaatatggtctgggatcatgggaagcaataaaaatggattct
tctttcgaaataggagataaaatattaacgaatgaggataaaaaacctcaagcaaaacac
ctacagtcgcgagcagagtacttattaaagcttattaaaaagttactggatcaaaagaat
ggaaaacaaaaaatgaaaaaacctcgaccgaagagggcaaataaagaaccggtcaccaaa
gatattgtcgaagatgacggtagctcagctgaagataaaaaaactaaaggtgttaaaaat
gataaaactgaaaagggtaaattaaaaattgaagaagtttctacacatgatgaaacttct
aacgataagaaagaaaaagacaaaaaacgtaaaaaagacgaagaccgcaagggtgacaaa
tctaaaggacggaagaaaccacgacaaagaggaaatgaaggaataccaggtcccatgcat
tttactgccaacaatgaaccaagggccttggaagtcttaggagatttagatccatcagtt
tttgaagagtgcaaagaaaaaatgagaccagttaaaaaggctctaaaggctctcgacaat
ccagaccaatctttatcggaaactgaacaagtgtcaagaaccagggcctgcctcacccag
ataggtactcaaatagatttgtgtgttgaagcatatccagattctcaaaaagtagaatgg
agaagtaatctctggtacttcgtttcaaaattcactaactttgatgcaaagcagttgtac
aagttgtacaagtatggcctaaagaaaaatgaagcttcaaagcaaaaagatgggaagcat
aaagaaaatgtcaagacaaataatcgtaataatcataactccataaaccatttaaaatca
ttcaagaaaaattcaaattcaaagcaaaaaagtgatacaaatgataaaaaagaaaagaaa
atgaagctagaaaaggagaaaactgataagcacgataaaaaccagcatacatcaggggtc
aagagaaaactagaagatggagaatgtgacccagaacccaatgataataaacgccacgaa
aggtatgttgttgattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (61)   
   KEGG ORTHOLOGY (1)   
   RefGene (57)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (9)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (7)   
DNA sequence (15)   
   RefSeq(nuc) (7)   
   GenBank (4)   
   EMBL (4)   
Protein domain (8)   
   Pfam (8)   
All databases (97)   

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