KEGG   Bombyx mori (domestic silkworm): 100141462
Entry
100141462         CDS       T02817                                 
Symbol
Pm-scl
Name
(RefSeq) PM-Scl autoantigen-like protein
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
bmor  Bombyx mori (domestic silkworm)
Pathway
bmor03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bmor00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100141462 (Pm-scl)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bmor03019]
    100141462 (Pm-scl)
Messenger RNA biogenesis [BR:bmor03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     100141462 (Pm-scl)
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC
Other DBs
NCBI-GeneID: 100141462
NCBI-ProteinID: NP_001108472
UniProt: Q8T0Z8
Position
1:6194670..6207595
AA seq 451 aa
MGSTIFIGAKNIPRPQLTFKDTIDNSENLWVPKISDKPNNIKPLALNILYTEKGEASKFD
YRGTTSIHNDVIIKTIIKICNRYEHPYQMELDMYNPPSQFIDPDPEPPMFPPPLEETKFT
YIDIESKLDELVEHLMAVEQIAVDVEHHSYRDLSGLYLILGITCLIQISTDEGGDFIIDA
LAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVYLVGLFDTYHAAKSLGLPALS
LKFLLMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQ
TNMLLSVFEDSRQTCASTYNKEVIHDESHIPLYIRSKKNFDNQQMAALKMLYKWRDSQAR
QLDESTTYLLPNHMLLSLSENLPRELQGVNACCDPMPPFVKQNVITIHRMILSVSFLISI
KKLVASYVINAIRLKFNDRYFYIGRTLKCCL
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgggatcaactatattcatcggagctaaaaacattccgcgtccacagcttactttcaag
gatacaattgataattctgagaatttgtgggtgcccaaaatttcagacaaaccaaacaac
atcaagcctttggctttaaacattttgtataccgagaagggcgaagcttcgaaattcgac
taccgggggaccactagtatacacaatgatgtaatcattaaaacgataataaaaatttgt
aacagatatgagcatccataccaaatggagttggacatgtataaccctccgtcgcagttc
atcgatcccgatccggagcctcccatgtttccaccccctctggaggaaacgaaattcact
tacatagatatagaatcgaagctagacgagttggttgaacaccttatggccgtcgaacaa
attgctgtagatgtagaacatcattcctatagggacctatcaggtttatatttaatttta
ggcataacgtgcctcattcaaatatcaactgatgaaggaggagactttatcattgacgct
ctcgctgtaagggaacacatacataaactgaatgtcgtcttcactgaccccaagaaacta
aaggtgttccacggtgccgatagcgatgttctttggcttcaacgtgatttcggcgtgtat
ttggtgggtcttttcgacacataccacgcagccaagtcactaggtctgcccgcgctttcg
ctcaaatttcttttgatgaagtattgcggcgttgacaccgataaaacgtatcgtctggcg
gactggcgcattcgtccgcttccggacgtgttgatcaagtacgctcgcatggatacgcac
tatcttttgtacgtttggcgcgttatgaagaatcaaataatcgagaagaatgctggacaa
acgaatatgctactgtcggtcttcgaggacagccgtcagacttgcgcctctacatacaat
aaagaggtgattcacgacgagagccacataccattatacatacgttcgaagaagaatttc
gataatcagcaaatggcggctcttaagatgctctacaaatggagagactcgcaggcgcgg
caactggacgaaagcaccacgtaccttctgccgaaccacatgctgctgtcgctctccgag
aatctgccgcgcgagctacaaggcgtcaacgcttgctgcgatccgatgccgccattcgtc
aaacagaatgtgataaccatccatcgtatgatcttatcggtcagttttttaatctccata
aaaaaattggtggctagctacgtgataaacgctattcgtttaaaatttaacgatagatat
ttctatataggacgaacgttgaaatgttgcttgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

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