KEGG   Bombyx mori (domestic silkworm): 101745944
Entry
101745944         CDS       T02817                                 
Name
(RefSeq) general transcription factor IIH subunit 1
  KO
K03141  transcription initiation factor TFIIH subunit 1
Organism
bmor  Bombyx mori (domestic silkworm)
Pathway
bmor03022  Basal transcription factors
bmor03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bmor00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    101745944
  09124 Replication and repair
   03420 Nucleotide excision repair
    101745944
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bmor03021]
    101745944
   03400 DNA repair and recombination proteins [BR:bmor03400]
    101745944
Transcription machinery [BR:bmor03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     101745944
DNA repair and recombination proteins [BR:bmor03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     101745944
SSDB
Motif
Pfam: BSD PH_TFIIH
Other DBs
NCBI-GeneID: 101745944
NCBI-ProteinID: XP_004923312
UniProt: A0A8R1WF08
Position
7:3419277..3430910
AA seq 574 aa
MTTSSEDVLLSVNCVRYKKGDGTLYVMNQRLAWMLEHRDTVAVSHKYADIKTQKISPAGK
AKIQLQVVLHDGTCSTFHFVNPGGPEAQAKDRDQVMVLLQNLLPKFKRQIDGELEMKSKL
LSLHPTLKHLYEDLVISKVINSEEYWNTPTLKQYTESSNIKQEAGVSGAFLADIQPQTDG
CNGLKYNLTQDIIDAIFKTYPAVRKKHIDYVPNKMTEAEFWTKFFQSHYFHRDRIASSSS
KDLFGECAKLDDHAIASAMRHTTLDLTVDLNKFIEHVPLLPTEEEASNEKDRSDNNSIHR
NMIKRFNQHSIMVLKASQKSNSSNNSNSSSSKTSNNNNKVIENGVKDTNGVSKRPAEHST
EPIEKKKRILEQIHYEDLVADQGNDDVQELKLSKVERYLLGPSYQISQTSVQTSHPPPLS
ALASVCQAWSSGQQCQRPARVSAGAAVGALGELSPGGALMRHHHAASMAQLIPADVKAEL
QRLYASCGELARELWRSFPQPGAPPANEQDAAPRATMFYDALLRFRNLKLRPFEEKMLRD
LTPLATTLTKHLNQIIDTACAKYVLWQQRQAKIR
NT seq 1725 nt   +upstreamnt  +downstreamnt
atgacaacatcatccgaagatgttttgctcagcgtgaattgcgtacgctataagaaggga
gacgggacactgtatgtaatgaatcaaagattagcatggatgttggaacacagagacaca
gtcgcagtatctcataaatatgctgatatcaaaacacaaaaaatttcaccagctggcaag
gctaaaatacagcttcaagtggttttacatgatggcacatgttctacatttcactttgtt
aacccgggtggcccagaggctcaggccaaagacagagatcaagtgatggtattactacaa
aaccttttaccaaagttcaaaagacagattgatggtgaactagaaatgaaatctaaattg
ttgtcattgcatccaacattaaaacatttgtacgaggatttagttatatctaaagttatt
aatagtgaggaatactggaatactcctactttgaaacagtatacagaatctagtaacatt
aaacaggaagctggtgtgtcaggtgcattccttgctgatattcaaccacagacagacggt
tgcaatggtttgaaatacaatctaactcaagatatcatagatgctatattcaaaacatat
ccagcagtcagaaagaaacatattgattatgtacccaataaaatgacggaagctgaattc
tggacgaaattctttcaatcacattattttcacagagatcgaatagcttcgtcatcgagc
aaggatttatttggagaatgtgctaaattagatgaccacgctattgcttcagcaatgaga
cacacaacactagatcttacggttgatttgaataagttcatagagcacgttccactgtta
ccgactgaagaagaagctagcaatgagaaggatcgatctgataataattctatacacaga
aatatgattaaacgtttcaaccaacactctattatggtgctcaaagctagtcaaaaatca
aattctagtaataatagtaatagcagtagtagtaaaacatcgaataacaacaataaagtt
atcgaaaacggtgtcaaagatacaaatggtgtctcaaagagaccggccgaacacagtaca
gaaccgatagaaaagaaaaaacgaatattagagcagatacactacgaggatctagttgca
gaccagggaaatgatgatgtacaggaattaaaattgtctaaggtagaaagatatttatta
ggaccgtcgtatcagataagtcagacgagtgttcagacgagccacccgccgccgctgtcg
gccttggcgtccgtatgtcaggcgtggtcgagcggccaacagtgccagcggccggcgcgg
gtgagcgcgggcgcggctgtgggcgcgctgggggagctcagtccgggcggcgcgctcatg
cggcaccaccacgccgcctctatggcacaactaataccggcggacgtgaaggcggagctt
cagaggctgtacgcgtcgtgcggcgagctggcgagggagctttggcgcagcttcccgcag
ccgggcgcgccgccagccaacgagcaggacgcggcgccgcgggcgaccatgttctacgac
gcgctgttgcggtttaggaatttgaaactgaggcccttcgaggagaagatgctccgtgac
ctgacgcccctggcgacgactctaacgaaacatttgaaccaaataatagacacggcctgc
gctaagtacgtgctctggcaacagaggcaagcgaagatacggtag

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