KEGG   Bacillus velezensis JS25R: NG74_03007
Entry
NG74_03007        CDS       T03423                                 
Symbol
pbpD
Name
(GenBank) Penicillin-binding protein 4 precursor
  KO
K18770  penicillin-binding protein 4 [EC:2.4.99.28 3.4.16.4]
Organism
bmp  Bacillus velezensis JS25R
Pathway
bmp00550  Peptidoglycan biosynthesis
bmp01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:bmp00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    NG74_03007 (pbpD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:bmp01003]
    NG74_03007 (pbpD)
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:bmp01011]
    NG74_03007 (pbpD)
Enzymes [BR:bmp01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.99  Transferring other glycosyl groups
    2.4.99.28  peptidoglycan glycosyltransferase
     NG74_03007 (pbpD)
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     NG74_03007 (pbpD)
Glycosyltransferases [BR:bmp01003]
 Polysaccharide
  Bacterial polysaccharide (excluding LPS)
   NG74_03007 (pbpD)
Peptidoglycan biosynthesis and degradation proteins [BR:bmp01011]
 Peptidoglycan biosynthesis and degradation
  Glycosyltransferase/DD-Transpeptidase (Class A PBP)
   NG74_03007 (pbpD)
SSDB
Motif
Pfam: Transgly Transpeptidase
Other DBs
NCBI-ProteinID: AIU83021
Position
3019658..3021532
AA seq 624 aa
MTMVRKIIGWILLLGIIPLFAFTVIASGKEVKQIKPFDQVLDKHIDLKAINLVQNSYMYD
RDGSLVSEIVSDHENRVIVPFNKIPNEVKQLFLTSEDRHFYEHKGFDFMGMVRAAASNFK
DHKIDQGASTITQQLARNVYLSHERTFSRKLTELAYSYQLEKKYSKDEILEGYLNTIYFN
NGVYGVGSAAQFYFSKPLKSLTLGEMAFICAIPNNPTLYDPLKHFDYTKKRQVRLLNGLK
KAGVISGKQLKKAEKEKIKLDINEKTNKYPDYVSYVNDEFTQLVSSSEGYDKRLEKASGK
AKQKIQSELSDRVSTLLKDGVKIYTALNPYMQNQVVAQVNQNLPYAGVQGGAAVINHQTH
QIIALSGGKDYHKYDFNRAYQAYRQPGSSIKPLLDYGPYIEKTGATPHSKIDASKFCSAD
YCPQNYNNRTYGTVTLETAFKYSYNTPAIRIMDRVGVNKAFSYLEPFHFAKLVSADYRLP
AALGGFTNGMTPLEMTNAYTTFGNNGVYTPSHAITKVTDLKGKTILKWKDEPTQVFSVRT
NMQIKEMMKAVVKSGTGKKANFKAPYVGGKSGTSNDYHDMWFVGLTDAYTMGVWVGKDTP
SSVEYLHDASPQLSIWKNTLQAAY
NT seq 1875 nt   +upstreamnt  +downstreamnt
gtgaccatggtacgtaaaataatcggatggattttgctgctcggcattatcccgttgttt
gcatttacagttattgcttccggcaaagaggtaaaacaaatcaagccttttgatcaggtg
ctcgataaacatattgatttaaaagcgatcaacctggttcaaaacagttacatgtatgac
agggacggaagccttgtttctgagattgtcagcgatcatgagaaccgcgtgatcgtgccc
tttaataaaataccgaatgaggtaaaacagctgtttttaacctctgaagaccgtcatttt
tatgagcataaagggtttgactttatggggatggtcagggcggccgcctccaatttcaaa
gatcataaaattgatcagggcgccagcaccatcacccagcagctggcaaggaatgtgtat
ttaagccatgaacgcaccttcagccgaaaactgacggagctggcctattcctatcagctt
gagaaaaaatacagcaaagatgagattttagaaggctacttaaatacgatttattttaat
aacggcgtatacggcgtcggttcggcggcacaattttatttcagcaagccgctgaaatct
ctcactttgggagagatggcctttatctgcgctatccctaataaccctacattatatgat
cctctcaagcattttgattatacgaaaaaacgacaagtcagattgcttaacggattgaaa
aaagcaggcgttatatccgggaaacagctgaaaaaagccgaaaaggaaaagatcaagctt
gatataaacgaaaaaacaaataaatatcctgactatgtttcctatgtaaatgatgaattc
acacagcttgtttcatcatccgaaggctatgacaaacgtcttgaaaaagcttccggaaag
gcgaaacaaaaaatacagagtgagctttccgacagggtcagcacattgttaaaagacggc
gtgaagatttatacggcgctgaatccgtatatgcaaaaccaggtcgtcgcccaagtgaat
caaaatctgccgtatgcaggcgtccagggcggagcggccgtgattaatcatcagacgcat
cagattatcgcgctttcaggcgggaaagattatcataaatatgatttcaaccgcgcctat
caagcatacagacagcccggttcatccattaagccgctgcttgattacggaccttacatt
gaaaagaccggcgcaacgccacacagcaagattgacgcaagcaaattctgcagtgcggat
tactgcccgcagaactataataaccgcacgtacggcacggtcacgctggaaacggcgttt
aaatactcgtacaacacaccagccatcagaatcatggaccgcgtcggcgtcaataaggcg
ttcagctaccttgaaccgtttcatttcgcgaagctggtcagcgcggattaccgtctgcct
gcggcgcttggcggttttacaaacggcatgacgccgcttgaaatgaccaatgcgtatacc
acgttcggcaacaacggcgtttatacgccgagtcacgcgattacaaaagtgactgattta
aaaggaaaaacgatattaaaatggaaagatgagccgacgcaggtattcagcgtgcggacc
aacatgcagatcaaagaaatgatgaaagccgtcgtcaaaagcggtacaggaaagaaagcg
aactttaaagctccgtacgtcggcggaaaatcaggaacgtcaaatgactatcacgatatg
tggtttgtcggtctgacggacgcttatacgatgggggtatgggtcggcaaggatacaccg
tcaagcgtcgaatatcttcatgacgcaagccctcagctttcgatctggaaaaacacgctg
caggcagcttactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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