KEGG T01208: BMQ

Priestia megaterium QM B1551: BMQ_4202

Entry

BMQ_4202          CDS       T01208

Symbol

topA

Name

(GenBank) DNA topoisomerase I

K03168

DNA topoisomerase I [EC:5.6.2.1]

Organism

bmq Priestia megaterium QM B1551

Brite

KEGG Orthology (KO) [BR:bmq00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bmq03032]
    BMQ_4202 (topA)
   03400 DNA repair and recombination proteins [BR:bmq03400]
    BMQ_4202 (topA)
Enzymes [BR:bmq01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     BMQ_4202 (topA)
DNA replication proteins [BR:bmq03032]
Prokaryotic type
  DNA Topoisomerases
   BMQ_4202 (topA)
DNA repair and recombination proteins [BR:bmq03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      BMQ_4202 (topA)

SSDB

Motif

Pfam:

Topoisom_bac zf-C4_Topoisom Toprim RNA_POL_M_15KD Toprim_4 Toprim_3 Auto_anti-p27

Other DBs

NCBI-ProteinID:

ADE71214

UniProt:

D5DQP9

Position

complement(4046214..4048289)

AA seq 691 aa
MSDYLVIVESPAKAKTIERYLGKKYKVKASMGHVRDLPKSQMGIDIEQDYNPKYITIRGK
GPVLKELKTAAKKAKKIYLAADPDREGEAIAWHLAHSLDVDIASDCRVVFNEITKEAIKE
SFKHPRAINMDLVDAQQARRILDRLVGYNISPLLWKKVKKGLSAGRVQSIAVRLIIDREK
EIAKFIPEEYWTVKATFQKGNDQFEGQLIEYQGKKVELSNENDVTNIVKQLDGNEFSISK
VTKRERKRNAAPSFTTSSLQQEAARKLNFRAKKTMMIAQQLYEGIDLGKEGTVGLITYMR
TDSTRISETAQTEARDYITNAYGNQFVATEKRKEKKNSNAQDAHEAIRPTSALRKPGEVK
EFLSRDQYRLYKLVWERFVASQMAPAIMDTMAVDLKNGDVTFRANGSKVKFPGFMKVYVE
GNDDQVEEKENLLPDLEEGEVAYSKDIDEKQHFTQPPPRYTEARLVKTLEELGIGRPSTY
APTLDTIQKRGYVALDNKRFVPTELGEIVLELVLEFFPEILDVEFTAKMENDLDEVEDGN
VQWVRVIDEFYSDFEKRLEHAEKEMREVEIKDEPAGEDCEECGSPMVYKMGRYGKFMACS
NFPDCRNTKPIVKEIGVKCPKCEEGNIVERKSKKKRTFYGCDRFPGCDFVSWDKPIARKC
PKCENLLVEKKQKKGTQVVCTSCDYKEEAQQ

NT seq 2076 nt +upstreamnt +downstreamnt
atgtctgactacctagtaattgtagaatcgcctgcaaaggctaaaacaattgaacgttat
ttaggaaagaaatataaagtaaaagcatcgatgggacatgttcgcgatttacctaaaagt
caaatgggaattgatattgaacaggattacaatccgaaatatattacaattcgcgggaaa
ggcccggttttaaaagaactaaaaacagcggctaaaaaagcaaaaaagatttacctagca
gccgatccagaccgtgaaggagaagcgattgcatggcacttggcgcacagtttggatgta
gacattgcatcggactgtcgcgtagtatttaacgagattacaaaagaagcgattaaagaa
tcttttaaacatccacgagcaattaatatggatttagtagatgctcaacaagcacgccgt
attcttgacaggctggttggctacaacatcagtccattgctgtggaaaaaagtgaaaaaa
ggattaagtgccggaagggttcaatcaattgcagtgcggttaattattgatcgtgaaaaa
gaaattgcaaagtttatcccagaagaatactggacggtaaaagcaacttttcaaaaaggg
aacgaccaatttgaaggccagttaatcgaatatcaagggaaaaaagtagagctatcgaat
gaaaatgatgtaaccaacattgttaaacaattagatggaaatgaattttcaatttctaaa
gtaacaaaacgtgagcgaaagcgtaatgcggctccttcttttaccacgtcttcattacag
caagaggcagcgcggaaactgaacttccgagcgaaaaaaacaatgatgattgcgcagcaa
ttatatgaaggaattgatttaggaaaagaaggtacagtaggtcttatcacgtatatgcgt
accgattctactcgtatttcagaaacagctcaaacagaagctagagattacattacgaac
gcatacggaaatcagtttgtggcaacggaaaagcgtaaagaaaagaaaaattcgaacgcg
caagatgcccacgaagcgattcgtccaacttcagctcttcgtaaaccaggagaggtaaaa
gagttcttatcgcgtgatcagtatcgactgtataagctagtatgggagcgcttcgttgct
agtcaaatggcacctgcaattatggatacaatggctgtagatttgaaaaatggagacgta
acatttagagcaaacggctcgaaagttaaatttccaggctttatgaaagtgtatgttgaa
ggcaatgatgatcaagtggaggaaaaagaaaatcttcttccagacttagaagaaggagaa
gtagcttattctaaggacatcgatgaaaagcagcacttcacacagccgccgccaagatat
actgaagctcgtttagtcaagacattagaagagctaggcattggccgaccgtctacatat
gctccaacacttgacacgattcaaaagcgcgggtacgtagcgctcgataacaagcgtttt
gttccaacagaacttggagaaattgtactagagcttgtattggagtttttcccagaaatt
ttagatgtagagtttacagctaaaatggaaaacgatttggatgaagtggaagatggtaat
gttcaatgggtgcgtgttattgacgaattttacagtgattttgaaaaacgcttagaacat
gctgaaaaagaaatgcgcgaagtggagattaaagatgaacctgccggagaagattgtgaa
gaatgcggttcacctatggtatacaaaatgggacgctacggaaaatttatggcatgctct
aattttcctgactgccgcaacacaaagccaattgtaaaagagattggtgtaaagtgtccg
aaatgtgaagaaggaaatatcgttgagcgaaaatcgaagaaaaagcgtacattttatggc
tgtgatcgattcccgggctgtgacttcgtatcttgggataagccgattgcaagaaaatgt
ccgaaatgtgaaaatctgcttgtggagaagaaacagaaaaaaggaactcaagtcgtctgt
acaagttgtgattataaagaggaagctcagcagtaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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