KEGG T00624: Bmul

Burkholderia multivorans ATCC 17616 (JGI): Bmul_6253

Entry

Bmul_6253 CDS T00624

Definition

DNA polymerase LigD ligase subunit

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

bmu Burkholderia multivorans ATCC 17616 (JGI)

Pathway

bmu03410	Base excision repair
bmu03420	Nucleotide excision repair
bmu03430	Mismatch repair
bmu03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:bmu03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:bmu03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:bmu03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:bmu03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_C Catalase

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

pBMUL01:116360..117391

AA seq 343 aa
MQRRTTAQKTRAGVVVAKNARMSEFIAPALAVLMSEPPPAGDWAYEIKFDGYRMLVRVDD
GDVRLYTRNGHDWTSKLPHLTAVLKRLPVQRAWLDAEAVCFAPDGRPNFSRLQEAFNSRR
TTGICLVVFDLMWIDDTDLRRRPWHERRSALTGIIGEVLREEVRFSEAIEADASAMLASA
CELGLEGIIGKQIDAPYRSGRSDRWIKLKCVRRQEFVIGGFSRRKGATAGVRALLLGVYE
EGGRLRYVGHVAPSFTPRQAREFESRLSALGRKRSPFASAPDPEVDREFHWLKPDLVAEV
AFLEWTPAGRLRHPSFCGLRADKPARTVSRENPASPKGAGSRR

NT seq 1032 nt +upstreamnt +downstreamnt
atgcaacggcgtacaacagcacaaaagacccgagcgggggtggtcgtagccaagaatgcg
cgcatgtccgaattcattgcgcctgccttggccgtgctaatgtccgagccgccgccggcg
ggagattgggcctacgagataaagttcgacggttaccggatgctcgtgcgcgtcgatgat
ggtgacgtacggctctatacaaggaatggccacgattggacgagtaagctcccgcacctg
accgcggtcctgaagaggttaccggtccaacgcgcgtggcttgatgccgaggccgtatgt
ttcgcccccgatgggcgccctaacttcagccgtctgcaggaagcattcaacagtcggcgt
accaccggtatatgtcttgtggtcttcgaccttatgtggatagacgacactgaccttcgc
cgtcggccatggcacgagcgccgatccgctctaacgggaatcatcggtgaagttcttcgg
gaggaggttcgattttccgaggcgatcgaggcagatgcgtccgccatgctggcatccgca
tgtgagctcggcctcgaaggcatcattggcaagcaaatcgacgcaccgtatcggtccgga
cggtcggatcggtggatcaaattgaaatgtgtcagacgccaggagttcgtgatcggcggg
ttttcccgccggaaaggggcgacagcaggggtgcgggcgttgctgttgggcgtgtacgag
gagggtggtcgcctgcgctatgtcggccacgtcgcgccgagctttacgccgcgacaggct
cgggaattcgagagtcggctctcggcgttgggccgcaaacgctcgccgtttgccagcgcc
cccgaccctgaggtcgatcgtgagtttcactggctgaagcccgacctcgtcgccgaagtg
gcgtttctcgagtggacgccggccggccggttacggcatccgtctttttgcgggctgcgc
gccgacaagccggcacgcacagtttcccgcgaaaatccggccagcccgaagggcgcaggt
agccgcagataa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-BMU (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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