KEGG   Burkholderia mallei SAVP1: BMASAVP1_A2205
Entry
BMASAVP1_A2205    CDS       T00457                                 
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bmv  Burkholderia mallei SAVP1
Pathway
bmv03410  Base excision repair
bmv03430  Mismatch repair
bmv03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bmv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BMASAVP1_A2205 (recJ)
   03430 Mismatch repair
    BMASAVP1_A2205 (recJ)
   03440 Homologous recombination
    BMASAVP1_A2205 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bmv03400]
    BMASAVP1_A2205 (recJ)
DNA repair and recombination proteins [BR:bmv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     BMASAVP1_A2205 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     BMASAVP1_A2205 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      BMASAVP1_A2205 (recJ)
SSDB
Motif
Pfam: DHH DHHA1 RecJ_OB Glyco_transf_4 KfrA_N
Other DBs
NCBI-ProteinID: ABM50959
Position
I:2186409..2188103
AA seq 564 aa
MTRIVTRSAVPAALDALARHGLHPVLARLYAARGIASPADVETALSRLVPPAQLKGCAQA
AALLADALEAGRKMLVVADYDCDGATACAVAVRGLRMFGAKIDYLVPNRFEYGYGLTPEI
VELAAARKPDLLITVDNGIASVDGVAAANARGIDVLVTDHHLPGDTLPAARAIVNPNQPG
CAFPSKHIAGVGVMFYVLLALRAELRARGAFGDARPEPRLDGLLDLVALGTVADVVRLDG
NNRVLVAQGLQRIRNGRMQPGIAALFRAAARDARSASGFDLGFGLGPRLNAAGRLSDMSL
GIECLTTDDVGRAWELAQQLDAMNRERREIEAGMQQQALADLASVDPAEAATITLFNPEW
HQGVIGIVAGRLKERFHRPAFTFAHADDGGARVKGSGRSIPGFHLRDAIDLISKREPDLI
VTFGGHAMAAGVTLETANVPRFAAAFETVAREWLSDDALARVIETDGDLEDAYFTPQVVE
LLDAAVWGQGFPAPLFSGEFDVASQALVKDKHLKLQLTRGRQRFNAIWFNHAEPLPARAT
LAFRLASDTWNGTTRVQLIVEHAA
NT seq 1695 nt   +upstreamnt  +downstreamnt
atgacccgcatcgtcacccgctccgccgttcccgccgcgctcgacgcgctcgcccgccac
gggctgcatcccgtgctcgcccgcctctacgcggcgcgcggaatcgcctcgcccgccgac
gtcgaaaccgcgctgtcgcgcctcgtgccgcccgcgcagctcaagggctgcgcgcaggcc
gccgcgctcctcgccgacgcgctcgaggccggccgcaagatgctcgtcgtcgccgattac
gactgcgacggcgcgaccgcctgcgcggttgccgtgcgcggcctgcggatgttcggcgcg
aagatcgattacctcgtgccgaaccgcttcgaatacggctacgggctcacgcccgagatc
gtcgagctcgcggccgcgagaaagcccgacctgctgatcaccgtcgacaacggaatcgcg
agcgtcgacggcgtcgcggccgcgaacgcgcgcggcatcgacgtgctcgtcaccgatcac
catctgcccggcgacacgctgcccgccgcgcgcgcgatcgtcaatccgaaccagcccggc
tgcgcgttcccgagcaagcatatcgcgggcgtcggcgtgatgttctacgtgctgctcgcg
ctgcgcgccgagctgcgcgcgcgcggcgcgttcggcgacgcccgccccgagccgcggctc
gacgggctgctcgatctcgtcgcgctcggcacggtggccgacgtcgtgcggctcgacggc
aacaaccgcgtgctcgtcgcgcaaggcctgcagcgcatccgcaacggacggatgcagccc
ggcatcgccgcgctctttcgcgcggccgcgcgcgacgcgcgcagcgcatcgggcttcgat
ctcggcttcggcctcggcccgcgcctgaacgcggcgggccgcctgtcggacatgtcgctc
ggcatcgaatgcctgacgaccgacgacgtgggccgcgcgtgggaactcgcgcagcagctc
gacgcgatgaaccgcgagcggcgcgagatcgaggccggcatgcagcagcaggcactcgcc
gatctcgcgtcggtcgaccccgccgaggcggccaccatcacgctcttcaaccccgaatgg
caccagggcgtgatcgggatcgtcgcggggcggctcaaggagcgctttcaccggccggcg
ttcacgttcgcgcacgcggacgacggcggcgcgcgcgtgaagggctccggccgctcgatt
cccggcttccatctgcgcgatgcgatcgacctgatctcgaagcgcgaacccgatctgatc
gtcacgttcggcggccacgcgatggccgcgggcgtcacgctcgagaccgcgaacgtgccg
cgcttcgcggccgcgttcgagacggtcgcgcgcgaatggctgtccgacgacgcgctcgcg
cgggtgatcgagacggacggcgatctcgaggatgcctacttcacgccgcaggtggtcgag
ctgctcgatgcggccgtctggggccagggcttcccggcgccgctcttctcgggcgaattc
gacgtcgcctcgcaggcgctcgtcaaggacaagcacctgaagctgcaattgacgcgcggc
cgccagcgcttcaacgcgatctggttcaatcacgcggagccgctgcccgcgcgcgcgacc
ctcgcgttccggctcgcgagcgatacgtggaacggcacgacgcgcgtgcaactgatcgtc
gagcacgcggcgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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